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README.md

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@@ -28,7 +28,13 @@ The pipeline for computing skeleton metrics consists of three main steps:
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We start with a set of ground truth graphs stored as individual SWC files, where the "xyz" attribute represents voxel coordinates in an image. Each ground truth graph is loaded and represented as a NetworkX graph with the voxel coordinates as a node-level attribute. The first step is to label the nodes of each graph with the corresponding segment IDs from the predicted segmentation.
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Note: Misalignments between the ground truth graphs and prediction segmentation mask are detected and corrected.
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Note: Misalignments between the ground truth graphs and prediction segmentation are detected and corrected.
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<p>
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<img src="imgs/misalignment-example" width="170" alt="misalignment-example">
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<br>
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<b> Figure: </b> Example of a misalignment between a ground truth graph and predicted segmentation.
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</p>
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### Step 2: Error Detection
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