Skip to content
Open
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Original file line number Diff line number Diff line change
Expand Up @@ -26,10 +26,10 @@
*/
public class FilterTunables {

@Tunable(description = "P-value Cutoff (value between 0 and 1). Gene set nodes with a p-value lower than the given value will not be included in the network.")
@Tunable(description = "P-value Cutoff (value between 0 and 1). Gene set nodes with a p-value greater than the given value will not be included in the network.")
public Double pvalue = 0.005;

@Tunable(description = "FDR Q-value Cutoff (value between 0 and 1). Gene set nodes with a q-value lower than the one entered will not be included in the network.")
@Tunable(description = "FDR Q-value Cutoff (value between 0 and 1). Gene set nodes with a q-value greater than the one entered will not be included in the network.")
public Double qvalue = 0.1;

@Tunable(description = "Similarity Cutoff (value between 0 and 1). Edges with a similarity score lower than the one entered will not be included in the network.")
Expand Down