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EnrichmentMap v2.1.0

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@mikekucera mikekucera released this 17 Mar 19:50

Bug fixes and Added features in 2.1.0:

Bug fixes:

Features:

  • Revamped post analysis interface and functionality.   
  • Post analysis can be run in known signature mode or signature discovery mode.  Known signature mode calculates post analysis edges for a small subset of sets.  Signature discovery mode allows for filtering of large set of potential signatures to help uncover most likely set.
  • Post analysis edges can be calculated using a two sided or one sided Mann whitney test using rank files from either dataset1 or dataset2 separately.  For example, this allows the user to look for pathways that contain a significant set of up-regulated miR targets only.  
  • Update g:profiler support so we no longer require a gmt file to be specified.
  • Add the ability to specify the set of genes associated with the geneset in the generic enrichment file.
  • Added “publication ready” button to legend panel so users can easily toggle between figure ready and normal view of network.