Skip to content

Zheng model visualization spec #294

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
plakrisenko merged 1 commit into from
Nov 25, 2025
Merged

Zheng model visualization spec #294

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
30 changes: 15 additions & 15 deletions Benchmark-Models/Zheng_PNAS2012/visualizationSpecification_Zheng_PNAS2012.tsv
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,16 +1,16 @@
plotId plotTypeData plotTypeSimulation xLabel xScale yLabel yScale legendEntry yValues xValues xOffset yOffset
plot1 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me0K36me0 observable_K27me0K36me0 time 0 0
plot2 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me0K36me1 observable_K27me0K36me1 time 0 0
plot3 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me1K36me0 observable_K27me1K36me0 time 0 0
plot4 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me0K36me2 observable_K27me0K36me2 time 0 0
plot5 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me1K36me1 observable_K27me1K36me1 time 0 0
plot6 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me2K36me0 observable_K27me2K36me0 time 0 0
plot7 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me0K36me3 observable_K27me0K36me3 time 0 0
plot8 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me1K36me2 observable_K27me1K36me2 time 0 0
plot9 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me2K36me1 observable_K27me2K36me1 time 0 0
plot10 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me3K36me0 observable_K27me3K36me0 time 0 0
plot11 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me1K36me3 observable_K27me1K36me3 time 0 0
plot12 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me2K36me2 observable_K27me2K36me2 time 0 0
plot13 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me3K36me1 observable_K27me3K36me1 time 0 0
plot14 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me2K36me3 observable_K27me2K36me3 time 0 0
plot15 MeanAndSD LinePlot Time [s] lin values lin simCondition - observable_K27me3K36me2 observable_K27me3K36me2 time 0 0
plot1 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me0K36me0 observable_K27me0K36me0 time 0 0
plot2 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me0K36me1 observable_K27me0K36me1 time 0 0
plot3 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me1K36me0 observable_K27me1K36me0 time 0 0
plot4 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me0K36me2 observable_K27me0K36me2 time 0 0
plot5 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me1K36me1 observable_K27me1K36me1 time 0 0
plot6 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me2K36me0 observable_K27me2K36me0 time 0 0
plot7 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me0K36me3 observable_K27me0K36me3 time 0 0
plot8 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me1K36me2 observable_K27me1K36me2 time 0 0
plot9 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me2K36me1 observable_K27me2K36me1 time 0 0
plot10 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me3K36me0 observable_K27me3K36me0 time 0 0
plot11 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me1K36me3 observable_K27me1K36me3 time 0 0
plot12 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me2K36me2 observable_K27me2K36me2 time 0 0
plot13 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me3K36me1 observable_K27me3K36me1 time 0 0
plot14 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me2K36me3 observable_K27me2K36me3 time 0 0
plot15 MeanAndSD LinePlot Time [h] lin % of total H3K27-K36 (old + new) signal lin K27me3K36me2 observable_K27me3K36me2 time 0 0