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1. CELLO_pipeline CELLO_pipeline Public

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2. CELLOseq CELLOseq Public

   Forked from MarioniLab/CELLOseq

   Transposable element expression at unique loci in single cells with CELLO-seq

   Shell

3. sarlacc sarlacc Public

   Forked from MarioniLab/sarlacc

   The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, clusters reads and produces a consensus sequence for each clus…

   R

4. CELLOseq_50ntUMI CELLOseq_50ntUMI Public

   An updated set of scripts for use with 50nt UMI sequences

   Shell

5. CELLO_pipeline_part_2 CELLO_pipeline_part_2 Public

   Forked from franci-r/CELLO_pipeline

   Nextflow based CELLO-seq pipeline optimised for SLURM clusters

   Nextflow 1

6. test test Public

   Forked from Berrenslab/CELLO_pipeline_part_2

   Nextflow based CELLO-seq pipeline optimised for SLURM clusters

   Nextflow