Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
45 commits
Select commit Hold shift + click to select a range
d0ab55c
Rearrange items (rename some) in Advanced Options tab
zoccoler Apr 25, 2025
c6b9cc2
Connect log checkbox and overlay_colormap dropdown to _replot and upd…
zoccoler Apr 25, 2025
a44f62b
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Apr 25, 2025
d1dfd5d
Enables log scale checkbox for both artists
zoccoler Apr 28, 2025
0b43977
pin minimum biaplotter version to 0.3.0
zoccoler Apr 28, 2025
5db2a38
Create _apply_default_layer_color method to re-color layer with defau…
zoccoler Apr 28, 2025
047f19e
apply default colors to layer upon `_reset` or when all color_indices…
zoccoler Apr 28, 2025
a619f3d
Start histogram colormap with viridis and overlay_colormap with magma
zoccoler Apr 28, 2025
74e9984
Ensures overlay is not shown if show_overlay_button is not checked
zoccoler Apr 28, 2025
5b012d9
Always enable log checkbox if histogram is active artist
zoccoler Apr 30, 2025
ea3f673
Re-order widgets in Advanced tab and add tooltips
zoccoler Apr 30, 2025
6f61a41
Link histogram colormap setting and put advanced options visibility s…
zoccoler Apr 30, 2025
ecb841d
Set manual bin number and connect n_bins_box widget to _replot (remov…
zoccoler Apr 30, 2025
9e37aed
Remove "Set" PushButton (bins are automatically updated upon changing…
zoccoler Apr 30, 2025
aabfcbe
Add setter method to bin_number
zoccoler Apr 30, 2025
ee3b371
Connect manual bin set directly do replot via signal
zoccoler Apr 30, 2025
9248038
Re-introduce `estimate_number_bins` function as plotter internal method
zoccoler Apr 30, 2025
dedda8b
Connect auto_bins_checkbox to _on_bin_auto_toggled method, which enab…
zoccoler Apr 30, 2025
45b6872
Start manual bins disabled (as auto bins checkbox starts checked)
zoccoler Apr 30, 2025
f4a9fb7
keep track of layer being unselected and paint them with default colo…
zoccoler Apr 30, 2025
9963f0e
Remove commented block
zoccoler Apr 30, 2025
9296f7f
Update show_overlay_signal name to show_color_overlay_signal
zoccoler Apr 30, 2025
cde7696
Makes color_overlay visible if a non-categorical feature was selected…
zoccoler Apr 30, 2025
ede62e6
simplify layer coloring logic by unifying methods
zoccoler May 5, 2025
ce3bf73
Move setting `show_color_overlay` up when hue is not categorical
zoccoler May 5, 2025
47d2bc6
Remove unnecessary overlay update after biaplotter `0.3.1`
zoccoler May 5, 2025
eae07ed
Do not color layer with selection or hue if show color overlay button…
zoccoler May 5, 2025
9d4781c
pin minimum biaplotter version to 0.3.1
zoccoler May 5, 2025
83ebac1
Merge branch 'v0.9.0' into connect_histogram_optional_features
zoccoler May 6, 2025
ca49641
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] May 6, 2025
93285e4
fix typo in dependency list
jo-mueller May 8, 2025
c133b85
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] May 8, 2025
655c897
make precommit happy
jo-mueller May 8, 2025
5effb00
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] May 8, 2025
f789a3a
added histogram parameters to tests
jo-mueller May 8, 2025
384c0bb
renamed function and moved into if clause
jo-mueller May 8, 2025
edbfa32
minor refactoring
jo-mueller May 8, 2025
46748ac
documentation more concise
jo-mueller May 8, 2025
2155f91
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] May 8, 2025
d1baa4d
Merge branch 'connect_histogram_optional_features' of https://github.…
jo-mueller May 8, 2025
1870a24
revert string line break
jo-mueller May 8, 2025
ba7ebbd
added colormaps to tested properties
jo-mueller May 8, 2025
fdb5688
linebreaks in comments
jo-mueller May 8, 2025
2c37d0b
Merge branch 'connect_histogram_optional_features' of https://github.…
jo-mueller May 8, 2025
e4d6658
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] May 8, 2025
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -40,7 +40,7 @@ dependencies = [
"napari-skimage-regionprops>=0.3.1",
"scikit-image",
"scipy",
"biaplotter>=0.2.0",
"biaplotter>=0.3.1",
"imagecodecs"
]

Expand Down
Loading