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…ut argument for the argparser and set the default to cwd
modified io.py and main.py to dump powdercif object as json
…s.py, corresponding test passes, main runs
…ns with verbose = True, test_cif_read passes
…on_function_issue43 generalized correlation analysis through correlate() function in util…
…or_issue41 writing skipped cifs to a log file in _output
…a_example3 renamde input_data_3 for users
threshold 0.8 instead of 8
catch 'nan' from correlate and skip the cif
handling min max as numbers correctly
handle attributeError in user_resampled
added continue when error is encountered
redo the attribute error line
Currently only plots one page so needs mods to do multiple pages
makes a function that will plot everything, when asked to.
reset the n_subplots to the currently preferred value
…cifs to gcp with this setup but not yet running app successfully
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