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Fix labels #20

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Merged
XimeAixa merged 3 commits into from
Oct 1, 2025
Merged

Fix labels #20

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e88518f
fix duplicated labels
XimeAixa Oct 1, 2025
e75725d
fix typo in term definition
XimeAixa Oct 1, 2025
51a3067
fix self regulation subclasses definitions
XimeAixa Oct 1, 2025
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42 changes: 3 additions & 39 deletions src/ontology/idpo-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -121,30 +121,6 @@ Declaration(AnnotationProperty(rdfs:label))
# Annotation Properties
############################

# Annotation Property: <http://purl.obolibrary.org/obo/IAO_0000112> (example of usage)

AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/IAO_0000112> "example of usage")

# Annotation Property: <http://purl.obolibrary.org/obo/IAO_0000115> (definition)

AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/IAO_0000115> "definition")

# Annotation Property: <http://purl.obolibrary.org/obo/IAO_0000700> (has ontology root term)

AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/IAO_0000700> "has ontology root term")

# Annotation Property: <http://purl.obolibrary.org/obo/OMO_0003000> (abbreviation)

AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OMO_0003000> "abbreviation")

# Annotation Property: <http://www.geneontology.org/formats/oboInOwl#hasDbXref> (database_cross_reference)

AnnotationAssertion(rdfs:label <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "database_cross_reference")

# Annotation Property: <http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion> (has_obo_format_version)

AnnotationAssertion(rdfs:label <http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion> "has_obo_format_version")

# Annotation Property: <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> (has_obo_namespace)

AnnotationAssertion(rdfs:label <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "has_obo_namespace")
Expand All @@ -166,18 +142,6 @@ AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/IDPO_0000088> "ha
ObjectPropertyDomain(<http://purl.obolibrary.org/obo/IDPO_0000088> <http://purl.obolibrary.org/obo/IDPO_0000080>)
ObjectPropertyRange(<http://purl.obolibrary.org/obo/IDPO_0000088> <http://purl.obolibrary.org/obo/IDPO_0000089>)

# Object Property: <http://purl.obolibrary.org/obo/RO_0000086> (has quality)

AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0000086> "has quality")

# Object Property: <http://purl.obolibrary.org/obo/RO_0002233> (has input)

AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0002233> "has input"@en)

# Object Property: <http://purl.obolibrary.org/obo/RO_0002234> (has output)

AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0002234> "has output")



############################
Expand Down Expand Up @@ -703,7 +667,7 @@ SubClassOf(<http://purl.obolibrary.org/obo/IDPO_0000057> <http://purl.obolibrary

# Class: <http://purl.obolibrary.org/obo/IDPO_0000058> (self activation)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/IDPO_0000058> "A self-regulatory mechanism in which intramolecular interactions induce or enhance the functional activity of a protein.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/IDPO_0000058> "A self regulatory mechanism in which intramolecular interactions induce or enhance the functional activity of a protein.")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/IDPO_0000058> "autoactivation")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/IDPO_0000058> "self-activation")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/IDPO_0000058> "disorder_function")
Expand All @@ -713,7 +677,7 @@ SubClassOf(<http://purl.obolibrary.org/obo/IDPO_0000058> <http://purl.obolibrary

# Class: <http://purl.obolibrary.org/obo/IDPO_0000059> (self inhibition)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/IDPO_0000059> "A self-regulatory mechanism in which intramolecular interactions repress or prevent the functional activity of a protein.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/IDPO_0000059> "A self regulatory mechanism in which intramolecular interactions repress or prevent the functional activity of a protein.")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/IDPO_0000059> "autoinhibition")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/IDPO_0000059> "self-inhibition")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/IDPO_0000059> "disorder_function")
Expand Down Expand Up @@ -783,7 +747,7 @@ SubClassOf(<http://purl.obolibrary.org/obo/IDPO_0000065> ObjectSomeValuesFrom(<h

# Class: <http://purl.obolibrary.org/obo/IDPO_0000066> (protein aggregate formation)

AnnotationAssertion(Annotation(<http://purl.obolibrary.org/obo/IAO_0000119> "PMID:33510441") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/IDPO_0000066> "Process involving a non-native state of a protein in which isoluble intermolecular interactions are established to form a higher-order irreversible assembly, usually as result of aberrant liquid-liquid phase separation.")
AnnotationAssertion(Annotation(<http://purl.obolibrary.org/obo/IAO_0000119> "PMID:33510441") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/IDPO_0000066> "Process involving a non-native state of a protein in which insoluble intermolecular interactions are established to form a higher-order irreversible assembly, usually as result of aberrant liquid-liquid phase separation.")
AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/IDPO_0000066> <https://orcid.org/0000-0001-8042-9939>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/IDPO_0000066> "PMID:38825008")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/IDPO_0000066> "aggregate assembly")
Expand Down