spectra-cluster-cli v1.1.2 (#292)

Author: jgriss

spectra-cluster-cli/v1.1.2/Dockerfile

@@ -0,0 +1,29 @@
+################## BASE IMAGE ######################
+FROM biocontainers/biocontainers:latest
+
+################## METADATA ######################
+LABEL base_image="biocontainers:latest"
+LABEL version="1"
+LABEL software="spectra-cluster-cli"
+LABEL software.version="v1.1.2"
+LABEL about.summary="PRIDE Cluster algorithm to cluster heterogeneous mass spectra"
+LABEL about.home="https://github.com/spectra-cluster/spectra-cluster-cli"
+LABEL about.documentation="https://github.com/spectra-cluster/spectra-cluster-cli"
+LABEL about.license_file="https://github.com/spectra-cluster/spectra-cluster-cli/LICENSE"
+LABEL about.license="SPDX:Apache-2.0"
+LABEL about.tags="Proteomics"
+
+################## MAINTAINER ######################
+MAINTAINER Johannes Griss <[email protected]>
+
+RUN VERSION=1.1.2 && \
+    ZIP=spectra-cluster-cli-${VERSION}-bin.zip && \
+    wget https://github.com/spectra-cluster/spectra-cluster-cli/releases/download/spectra-cluster-cli-${VERSION}/$ZIP -O /tmp/$ZIP && \
+    unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
+    rm /tmp/$ZIP && \
+    bash -c 'echo -e "#!/bin/bash\njava -jar /home/biodocker/bin/spectra-cluster-cli-1.1.2.jar $@" > /home/biodocker/bin/spectra-cluster-cli' && \
+    chmod +x /home/biodocker/bin/spectra-cluster-cli
+
+ENV PATH /home/biodocker/bin/spectra-cluster-cli:$PATH
+
+WORKDIR /data/