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NOVOR_1b: Fixed cmd line missing arg
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novor/1b/Dockerfile

Lines changed: 2 additions & 2 deletions
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@@ -3,7 +3,7 @@ FROM biocontainers/biocontainers:v1.0.0_cv4
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################## METADATA ######################
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LABEL base_image="biocontainers:v1.0.0_cv4"
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LABEL version="4"
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LABEL version="5"
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LABEL software="Novor"
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LABEL software.version="1b"
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LABEL about.summary="real-time peptide de novo sequencing"
@@ -20,7 +20,7 @@ RUN ZIP=novor_academic_latest.zip && \
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wget https://github.com/BioDocker/software-archive/releases/download/NovoR/$ZIP -O /tmp/$ZIP && \
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unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
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rm /tmp/$ZIP && \
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bash -c 'echo -e "#!/bin/bash\njava -jar /home/biodocker/bin/novor_v1b/lib/novor.jar $@" > /home/biodocker/bin/novor' && \
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bash -c 'echo -e "#!/bin/bash\njava -jar /home/biodocker/bin/novor_v1b/lib/novor.jar \$@" > /home/biodocker/bin/novor' && \
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chmod +x /home/biodocker/bin/novor
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ENV PATH /home/biodocker/bin:$PATH

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