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Add libraries to init container #21

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Add libraries to init container #21

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ea30dee
Add libraries to init container
almahmoud May 2, 2022
4266c77
Remove separate claim from init container
almahmoud May 2, 2022
b4f6609
Flip helper init command
almahmoud May 2, 2022
d04a2e5
Removed wrong side
almahmoud May 2, 2022
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4 changes: 2 additions & 2 deletions bioconductor/templates/_helpers.tpl
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Expand Up @@ -88,10 +88,10 @@ Return which PVC to use for libraries
Creates the bash command for the init containers used to place files and change permissions in the rstudio pods
*/}}
{{- define "bioconductor.init-container-commands" -}}
cp -anrL /opt/configs/readonly/rstudio/ /home/;
chown -R rstudio:rstudio /home/rstudio;
{{- if and .Values.libraries.persistence.enabled (not .Values.libraries.persistence.separateClaim.enabled) }}
mkdir -p {{.Values.persistence.mountPath}}/persisted-library/R;
{{- end }}
cp -anrL /opt/configs/readonly/rstudio/ /home/;
chown -R rstudio:rstudio /home/rstudio;
{{- end -}}

2 changes: 1 addition & 1 deletion bioconductor/templates/deployment.yaml
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Expand Up @@ -116,4 +116,4 @@ spec:
{{- end }}
{{- if .Values.extraVolumes }}
{{- .Values.extraVolumes | toYaml | nindent 8 }}
{{- end }}
{{- end }}