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v2.0.4

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@ncborcherding ncborcherding released this 20 May 16:39
9f6ef41

scRepertoire VERSION 2.0.4

UNDERLYING CHANGE

  • getCirclize() refactored to prevent assumptions and added include.self argument
  • Added .count.clones() internal function for getCirclize() and clonalNetwork()
  • Added order.by parameter to visualizations to specifically call order of plotting using a vector or can use "alphanumeric" to plot things in order
  • Fix issue with clonalLength() and NA handling
  • clonalCompare() now retains the original clonal info if using relabel.clones
  • Add Dandelion support in to loadContigs() and testthat
  • Fixed issue with positionalProperty() assumption that the clones will all have 20 amino acids.
  • Fixed IGH/K/L mistaking gene issue in vizGenes()