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Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please fill out an issue on https://github.com/cdcgov/template logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 24 35

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    40 49

Repositories

Showing 10 of 526 repositories
  • PyRenew Public

    Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

    CDCgov/PyRenew’s past year of commit activity
    Python 26 Apache-2.0 9 64 8 Updated Mar 14, 2026
  • cfa-stf-routine-forecasting Public

    Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.

    CDCgov/cfa-stf-routine-forecasting’s past year of commit activity
    Python 16 Apache-2.0 3 63 5 Updated Mar 14, 2026
  • ocio-wsl Public

    This repository build images for Windows Subsystem Linux (WSL2) for CDC developers.

    CDCgov/ocio-wsl’s past year of commit activity
    Shell 3 MIT 0 5 5 Updated Mar 14, 2026
  • prime-fhir-converter Public

    The CDC’s Pandemic-Ready Interoperability Modernization Effort (PRIME) Java based FHIR conversion library

    CDCgov/prime-fhir-converter’s past year of commit activity
    Kotlin 14 Apache-2.0 5 2 3 Updated Mar 14, 2026
  • nhsnlink Public
    CDCgov/nhsnlink’s past year of commit activity
    C# 1 1 0 13 Updated Mar 14, 2026
  • ixa-epi-covid Public
    CDCgov/ixa-epi-covid’s past year of commit activity
    Rust 1 Apache-2.0 0 16 6 Updated Mar 14, 2026
  • cfa-vap-hm Public

    Declarative environment management for the CFA VAP using nix.

    CDCgov/cfa-vap-hm’s past year of commit activity
    Nix 1 0 0 0 Updated Mar 14, 2026
  • cfa-dataops Public
    CDCgov/cfa-dataops’s past year of commit activity
    Python 4 Apache-2.0 1 4 1 Updated Mar 14, 2026
  • CDCgov/cfa-catalog-pub’s past year of commit activity
    Python 1 Apache-2.0 0 4 2 Updated Mar 14, 2026
  • CDCgov/cfa-viral-lineage-model’s past year of commit activity
    Python 11 Apache-2.0 2 5 1 Updated Mar 14, 2026