more updates to age-specific symptoms

Author: eqmooring

src/parameters.rs

@@ -2,7 +2,6 @@ use ixa::{HashMap, HashMapExt, prelude::*};
 use serde::{Deserialize, Serialize};
 use std::{fmt::Debug, path::PathBuf};
 
-use crate::Age;
 use crate::infection_importation::ImportCasesFromFile;
 use crate::reports::ReportParams;
 use crate::settings::SettingProperties;

src/reports/mod.rs

@@ -125,15 +125,16 @@ mod test {
                         "include": false
                     },
                     "infectiousness_rate_fn": {"Constant": {"rate": 1.0, "duration": 5.0}},
+                    "symptom_age_groups": {"Young": 0, "Old": 50},
                     "probability_mild_given_infect": 0.7,
                     "infect_to_mild_delay": {"mu": 0.1, "sigma": 0.0},
-                    "probability_severe_given_mild": 0.2,
+                    "probability_severe_given_mild": {"Young": 0.05, "Old": 0.3},
                     "mild_to_severe_delay": {"mu": 0.1, "sigma": 0.1},
                     "mild_to_resolved_delay": {"mu": 0.1, "sigma": 0.1},
-                    "probability_critical_given_severe": 0.2,
+                    "probability_critical_given_severe": {"Young": 0.05, "Old": 0.1},
                     "severe_to_critical_delay": {"mu": 0.1, "sigma": 0.1},
                     "severe_to_resolved_delay": {"mu": 0.1, "sigma": 0.1},
-                    "probability_dead_given_critical": 0.2,
+                    "probability_dead_given_critical": {"Young": 0.005, "Old": 0.1},
                     "critical_to_dead_delay": {"mu": 0.1, "sigma": 0.1},
                     "critical_to_resolved_delay": {"mu": 0.1, "sigma": 0.1},
                     "settings_properties": {},