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Clinical-Genomics / genmod Public

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Mivmir score config and docker container#181

Draft

torbjorgen wants to merge 12 commits intomainClinical-Genomics/genmod:mainfrom

mivmir_score_configClinical-Genomics/genmod:mivmir_score_configCopy head branch name to clipboard

Conversation Commits12 (12)Checks Files changed

Draft

Mivmir score config and docker container#181
torbjorgen wants to merge 12 commits intomainfrom
mivmir_score_config

Commits

Commits on Jul 3, 2025

fixtures/test_vcf_annotated_scored.vcf: Add missing CLNSIG field
torbjorgen
committed
fixtures/test_vcf_annotated_scored.vcf: Add normalized scoring entries to VCF fixture
torbjorgen
committed
Compound/VariantPrinter: Use multip. logging module
torbjorgen
committed
Compound scorer: Catch and log exceptions
torbjorgen
committed
Compound scorer: Avoid deadlock on failing subprocess scorers
torbjorgen
committed
(compound) score: Add annotation suffix to allow variant rescoring
torbjorgen
committed
Ruff format
torbjorgen
committed
Update CHANGELOG
torbjorgen
committed
HACK: Add makefile minimal test target for dev
torbjorgen
committed
Add stripped down MIVMIR-Genmod rank config
torbjorgen
committed
Add test for MIVMIR-GENMOD score config
torbjorgen
committed
Makefile: Target to export to Singularity image
torbjorgen
committed

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