Based on pre-print: https://www.biorxiv.org/content/10.1101/2025.01.30.635787v1.abstract A Morse potential is used to describe cell-cell adhesion at the intercellular junction.
List of directory:
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Configurations:
Initial configurations of cell boundary and cell-matrix adhesions of each cell in the doublet
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Model_simulation:
C/C++ codes for simulating models with input files from "Configuration"
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Result_processing:
MATLAB codes for producing kymographs of traction stresses and doublet length over time using simulation data from running C/C++ codes
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Example
Examples of kymographs, doublet length over time, and movies