CTM-324 Update urllib3 et al.

[aednichols]

• Primary objective: upgrade urllib3 to latest version to address security issue
  • We do not use it directly, it is used by requests
• Upgrade requests to latest version
  • Not strictly necessary but seems wise given urllib3 change
• Update Java image to latest. It is used to run a prebuilt JAR when generating Swagger YAML, so Any Java Will Do
  • This will help DSP Devops retire the old Java 11 image
• Update Python runtime to 3.11
  • Current Python 3.10 is EOL in October 2026
  • 3.12 is a bridge too far, would need to upgrade one of our deps

Tested by building job-manager-api-cromwell image and deploying on Terra Dev. Job Manager runs and works as expected.

> kubectl exec -it -n terra-dev jobmanager-deployment-87c99ff44-bqv7f -c jobmanager-api  -- bash
root@jobmanager-deployment-87c99ff44-bqv7f:/app# python --version
Python 3.11.14

root@jobmanager-deployment-87c99ff44-bqv7f:~# cat /app/jobs/requirements.txt 
[...]
requests==2.32.5
[...]
urllib3==2.6.3
[...]