Releases: DenisTitovLab/DataDrivenEnzymeRateEqs.jl
Releases · DenisTitovLab/DataDrivenEnzymeRateEqs.jl
v0.1.3
DataDrivenEnzymeRateEqs v0.1.3
Merged pull requests:
- Fix plotting bug due to empty Legend with CairoMakie 0.15 (#52) (@Denis-Titov)
v0.1.2
DataDrivenEnzymeRateEqs v0.1.2
Merged pull requests:
- CompatHelper: bump compat for CairoMakie to 0.15, (keep existing compat) (#49) (@github-actions[bot])
- Bump actions/checkout from 4 to 5 (#50) (@dependabot[bot])
- bump version (#51) (@Denis-Titov)
v0.1.1
DataDrivenEnzymeRateEqs v0.1.1
Merged pull requests:
- Fix Vmax treatment in MWC equations (#48) (@Denis-Titov)
v0.1.0
DataDrivenEnzymeRateEqs v0.1.0
Merged pull requests:
- CompatHelper: add new compat entry for TestEnv at version 1, (keep existing compat) (#6) (@github-actions[bot])
- release first version and register package (#7) (@Denis-Titov)
- update julia and symbolics compats (#8) (@Denis-Titov)
- Bump julia-actions/setup-julia from 1 to 2 (#9) (@dependabot[bot])
- Bump julia-actions/cache from 1 to 2 (#10) (@dependabot[bot])
- Refactor rate equation derivation (#11) (@Denis-Titov)
- Add-steady-state-equation-support (#12) (@Denis-Titov)
- update docs (#13) (@Denis-Titov)
- update docs (#14) (@Denis-Titov)
- add index.md back (#15) (@Denis-Titov)
- Upgrade qssa rate equation param removal code (#16) (@Denis-Titov)
- Switch to lazy storage of param removal code to save memory (#17) (@Denis-Titov)
- More efficient removal code calculations (#18) (@Denis-Titov)
- remove @time (#19) (@Denis-Titov)
- Upgrade reverse and forward_selection_next_param_removal_codes() to make them faster (#20) (@Denis-Titov)
- add option to save intermediate results (#21) (@Denis-Titov)
- add semincolon (#22) (@Denis-Titov)
- Fix silent error where param removal codes where not applied on the first iteration (#23) (@Denis-Titov)
- decease allocation in loss function (#24) (@Denis-Titov)
- add plot_fit_on_data() function and tests (#25) (@Denis-Titov)
- CompatHelper: bump compat for CairoMakie to 0.12, (keep existing compat) (#26) (@github-actions[bot])
- add function and tests to filter practically unidentifiable parameters (#27) (@Denis-Titov)
- Prevent param snooping in qssa equations and catch wrong param range entry (#28) (@Denis-Titov)
- add filtering of qssa removal codes at each iterations (#29) (@Denis-Titov)
- modify qssa derivation to allow rate calculation wo products (#30) (@Denis-Titov)
- Handle inaccurate range number params entries (#31) (@Denis-Titov)
- Make forward model selection and range number params a kwarg (#32) (@Denis-Titov)
- Add heuristics to decrease number of possible equations (#33) (@Denis-Titov)
- Correct bugs related to unidentifyable params and empty param subsets (#34) (@Denis-Titov)
- Prevent modifying nonidentifyable params in qssa equations search (#35) (@Denis-Titov)
- Fixes for qssa search parameter snooping (#36) (@Denis-Titov)
- CompatHelper: bump compat for Symbolics to 6, (keep existing compat) (#37) (@github-actions[bot])
- Merge May's Code (#38) (@Maybh)
- Limit mwc equation number (#40) (@Denis-Titov)
- Allow substrate and product to also be regulator or inhibitor (#41) (@Denis-Titov)
- add codecov to readme and CI.yml (#45) (@Denis-Titov)