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Tomogram pixel location #287

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Merged
KarlLevik merged 2 commits into from
Jun 27, 2025
Merged

Tomogram pixel location #287

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6d04e13
Add pixel location columns to tomogram table
gfrn Jun 27, 2025
77bf50b
Undo columns in ParticleClassification, create them in Tomogram
gfrn Jun 27, 2025
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6 changes: 6 additions & 0 deletions schemas/ispyb/updates/2025_06_27_Tomogram_pixelLocation.sql
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INSERT IGNORE INTO SchemaStatus (scriptName, schemaStatus) VALUES ('2025_06_27_Tomogram_pixelLocation.sql', 'ONGOING');

ALTER TABLE ParticleClassification ADD pixelLocationX int COMMENT 'pixel location of tomogram centre on search map image (x)', ALGORITHM=INSTANT;
ALTER TABLE ParticleClassification ADD pixelLocationY int COMMENT 'pixel location of tomogram centre on search map image (y)', ALGORITHM=INSTANT;

UPDATE SchemaStatus SET schemaStatus = 'DONE' WHERE scriptName = '2025_06_27_Tomogram_pixelLocation.sql';
9 changes: 9 additions & 0 deletions schemas/ispyb/updates/2025_06_27_undo_ParticleClassification_set_Tomogram_pixelLocation.sql
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Original file line number Diff line number Diff line change
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INSERT IGNORE INTO SchemaStatus (scriptName, schemaStatus) VALUES ('2025_06_27_undo_ParticleClassification_set_Tomogram_pixelLocation.sql', 'ONGOING');

ALTER TABLE ParticleClassification DROP COLUMN IF EXISTS pixelLocationX;
ALTER TABLE ParticleClassification DROP COLUMN IF EXISTS pixelLocationY;

ALTER TABLE Tomogram ADD pixelLocationX int COMMENT 'pixel location of tomogram centre on search map image (x)', ALGORITHM=INSTANT;
ALTER TABLE Tomogram ADD pixelLocationY int COMMENT 'pixel location of tomogram centre on search map image (y)', ALGORITHM=INSTANT;

UPDATE SchemaStatus SET schemaStatus = 'DONE' WHERE scriptName = '2025_06_27_undo_ParticleClassification_set_Tomogram_pixelLocation.sql';