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swapping pyrodigal from local to nf-core, for combined_gene_caller subworkflow#120

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mberacochea merged 3 commits intomainfrom
update/combined_gene_caller
Oct 21, 2025
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swapping pyrodigal from local to nf-core, for combined_gene_caller subworkflow#120
mberacochea merged 3 commits intomainfrom
update/combined_gene_caller

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@vagkaratzas
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@vagkaratzas vagkaratzas commented Oct 21, 2025

The pyrodigal module wasnt used in any other subworkflow or pipeline, so it's removed.

@vagkaratzas vagkaratzas changed the title swapping pyrodigal from local to nf-core swapping pyrodigal from local to nf-core, for combined_gene_caller subworkflow Oct 21, 2025
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@chrisAta chrisAta left a comment

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looks good to me!

@vagkaratzas
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@mberacochea since you are using this subworkflow let me know if it looks ok to merge

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It looks good to me.. the snapshot didn't change so.. all good.

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:shipit:

@mberacochea mberacochea merged commit d86b1ae into main Oct 21, 2025
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@mberacochea mberacochea deleted the update/combined_gene_caller branch October 21, 2025 21:17
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3 participants