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Bump the container version to the path1 for InterProScan #142

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Merged
mberacochea merged 2 commits into from
Feb 13, 2026
Merged

Bump the container version to the path1 for InterProScan #142

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9264d1c
Bump the container version to the path1 for InterProScan
mberacochea Feb 13, 2026
f4d61e3
Update the test snapshot
mberacochea Feb 13, 2026
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5 changes: 4 additions & 1 deletion modules/ebi-metagenomics/interproscan/main.nf
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ process INTERPROSCAN {
tag "$meta.id"
label 'process_long'

container 'microbiome-informatics/interproscan:5.76-107.0'
container 'microbiome-informatics/interproscan:5.76-107.0_patch1'

containerOptions {
def containerArgs = []
Expand Down Expand Up @@ -44,6 +44,9 @@ process INTERPROSCAN {
gzip -c -d ${fasta} > ${fasta_file_name}
fi

# Set the max memory for the JVM
export JAVA_OPTS="-Xmx${task.memory.toGiga()}G"

# -dp (disable precalculation) is on so no online dependency
interproscan.sh \\
-cpu $task.cpus \\
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