Releases: EBIvariation/CMAT
Releases · EBIvariation/CMAT
v3.4.3
What's Changed
- EVA-3984: Add GCloud upload script and update SOP by @apriltuesday in #484
- Issue 428: Mappings investigations by @apriltuesday in #486
- Fix bug in find_replacement_mapping by @apriltuesday in #488
- EVA-4033: Check latest mappings against OT regex by @apriltuesday in #491
- EVA-4047: Check regex in evidence string generation by @apriltuesday in #493
- Bump OT json schema version
Full Changelog: v3.4.2...v3.4.3
v3.4.2
What's Changed
- EVA-3922: Additional sankey diagrams and updated report text by @apriltuesday in #481
- Parsers for additional somatic clinical classification fields and collection method type
- Bump OT JSON schema version
Full Changelog: v3.4.1...v3.4.2
v3.4.1
What's Changed
- EVA-3886: Updates to manual curation pipeline by @apriltuesday in #474
- EVA-3887: Update manual curation SOP by @apriltuesday in #476
- Fix mappings file header and spreadsheet export by @apriltuesday in #478
- EVA-3914: Update ClinVar diagrams by @apriltuesday in #477
Full Changelog: v3.4.0...v3.4.1
v3.4.0
What's Changed
- Issue 462: Investigation notebook and adding nonspecific trait names by @apriltuesday in #463
- Bump requests from 2.32.3 to 2.32.4 by @dependabot[bot] in #464
- Issue 414: Using OLS label and synonym matches in trait processing by @apriltuesday in #465
- Fix incorrect mapping string in manual curation by @apriltuesday in #467
- Fix integration test by @apriltuesday in #469
- Fix matching for previous mappings by @apriltuesday in #472
- Bump versions for September 2025 by @apriltuesday in #473
Full Changelog: v3.3.4...v3.4.0
v3.3.4
What's Changed
- Fix bug and add new review status strings by @apriltuesday in #460
- Small script to search for specific label with exact matches by @tcezard in #459
- Bump OT schema and pipeline versions by @apriltuesday in #461
Full Changelog: v3.3.3...v3.3.4
v3.3.3
What's Changed
- EVA-3732 - New script to help find children that match the definition of a new term by @tcezard in #452
- Issue 435 revisited - gene-related disorder terms by @apriltuesday in #453
- Issue 435: Update submission filter and add test by @apriltuesday in #454
- Bump versions for 25.06 release by @apriltuesday in #457
Full Changelog: v3.3.2...v3.3.3
v3.3.2
What's Changed
- Issue-447: Investigation notebook for new somatic/oncogenic clinical classifications by @apriltuesday in #448
- Bump versions for 2025.03 submission by @apriltuesday in #451
Full Changelog: v3.3.1...v3.3.2
v3.3.1
What's Changed
- Issue 434: Add VCV IDs to evidence strings by @apriltuesday in #444
- Update for Ensembl 113
Full Changelog: v3.3.0...v3.3.1
v3.3.0
What's Changed
- Remove obsolete review statement by @tcezard in #441
- Model for ClinVar submitted records (SCVs) by @apriltuesday in #442
- Issue 435: Filter gene-related disorder submission from curation and evidence generation by @apriltuesday in #443
Full Changelog: v3.2.2...v3.3.0
v3.2.2
What's Changed
- Bump versions for 24.09 submission by @apriltuesday in #439
- Fix issue in counts by @apriltuesday in #440
Full Changelog: v3.2.1...v3.2.2