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casparvl wants to merge 27 commits into from
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Adapt subdir for CUDA toolkit in host injections for 2025.06 #64

casparvl wants to merge 27 commits into from

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@casparvl casparvl commented Aug 19, 2025

This PR mimics #59 , except that it does not add an EasyStack file, as no rebuilding is needed for 2025.06 (no CUDA was deployed yet).

Caspar van Leeuwen and others added 27 commits August 6, 2025 22:30
Try to change the subdir in which the CUDA toolkit is installed so th…
a2f5544 
…at it also doesnt include the CPU microarchitecture
Fix sed command
333e009
Ok, now actually overwrite the EASYBUILD_INSTALLPATH
1ac3748
Fix the installpath that is reported
2cfe306
Add software to reported dir
d49059c
Reassing host_inj_path
b63778e
Change host injections location for binary non-redistributable files …
e3f746f 
…to e.g. /cvmfs/software.eessi.io/host_injections/x86_64, i.e. only include the CPU family in the prefix, not microarchitecture or accelerator architecture. Since these are binary installs, we don't need multiple copies, and requiring site admins to run the install scripts once per micro-architecture is just annoying (and requires more storage)
Update Lmod hook to print more specific warning in case the CUDA / cu…
2e10d3d 
…DNN package was found in the old host-injections location (with micro-arch specific subdir). Also, adapt the path to search for the regular LmodError
Make sure update SitePackage.lua is included in the tarball
26cd405
fix the replacement, since the already contains , so now it was tryin…
b124fcf 
…g to find /accel/accel/nvidia/ccXX. Fixed now to /accel/nvidia/ccXX
Undo change on create_tarball.sh
ecfd373
Fix typo
448d9e0
Small fix, forgot to change name when copying
64069f9
Fixed more issues
2b03950
Fixed more issues
56bfd45
Make sure it actually raises an error
5e92c55
Insert two spaces
7119169
Cleanout the old installation script for the CUDA toolkit, as it is r…
d4af942 
…eplaced (and would install in an outdated prefix)
Add easystack file to build CUDA and cuDNN in the software layer
8c903fd
Accept EULA for cuDNN
0ab005b
Fix chicken and egg problem where EESSI_ACCELERATOR_TARGET is not set…
3dfe565 
… by the EESSI module, unless the installation directory already exists.
Some more clear code commenting
d36908d
Make sure to actual check for EESSI_ACCELERATOR_TARGET_OVERRIDE to be…
8ca152e 
… defined
Added readme to explain that there SHOULD normally not be any easysta…
f237c93 
…ck file being added to software-layer-scripts
@casparvl @boegel
Apply suggestions from code review
e974183 
Co-authored-by: Kenneth Hoste <[email protected]>
Remove easystack file. CUDA 12.1.1 was already covered in the other o…
7a1e4c1 
…ne as well
Removed EasyStacks so we can deploy the changes from EESSI#59 also fo…
1dbfe8b 
…r 2025.06
@casparvl casparvl mentioned this pull request Aug 19, 2025
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casparvl commented Aug 19, 2025

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:zen2

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-amd-zen2 for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/83959

date job status comment
Aug 19 10:32:17 UTC 2025 submitted job id 83959 awaits release by job manager
Aug 19 10:33:08 UTC 2025 released job awaits launch by Slurm scheduler
Aug 19 10:34:09 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-83959.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2025.06-software-linux-x86_64-amd-zen2-1755599597-0.tar.gzsize: 0 MiB (26880 bytes)
entries: 4
modules under 2025.06/software/linux/x86_64/amd/zen2/modules/all
no module files in tarball
software under 2025.06/software/linux/x86_64/amd/zen2/software
no software packages in tarball
reprod directories under 2025.06/software/linux/x86_64/amd/zen2/reprod
no reprod directories in tarball
other under 2025.06/software/linux/x86_64/amd/zen2
2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
.lmod/SitePackage.lua
Aug 19 10:34:09 UTC 2025 test result
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Reason
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Details
✅ job output file slurm-83959.out
❌ found message matching ERROR:
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New job on instance eessi-bot-mc-aws for CPU micro-architecture aarch64-neoverse_n1 for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/83970

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✅ job output file slurm-83970.out
✅ no message matching FATAL:
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✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2025.06-software-linux-aarch64-neoverse_n1-1755600052-0.tar.gzsize: 0 MiB (26889 bytes)
entries: 4
modules under 2025.06/software/linux/aarch64/neoverse_n1/modules/all
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software under 2025.06/software/linux/aarch64/neoverse_n1/software
no software packages in tarball
reprod directories under 2025.06/software/linux/aarch64/neoverse_n1/reprod
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other under 2025.06/software/linux/aarch64/neoverse_n1
2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
.lmod/SitePackage.lua
Aug 19 10:41:55 UTC 2025 test result
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Reason
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Details
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✅ job output file slurm-83971.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
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eessi-2025.06-software-linux-aarch64-neoverse_v1-1755600052-0.tar.gzsize: 0 MiB (26891 bytes)
entries: 4
modules under 2025.06/software/linux/aarch64/neoverse_v1/modules/all
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2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
.lmod/SitePackage.lua
Aug 19 10:41:56 UTC 2025 test result
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Reason
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Details
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casparvl commented Aug 19, 2025

Not sure if we'll ever deploy CUDA there, but, should make sure the scripts are at least up to date with what's in the software-layer-scripts repo.

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-deucalion arch:aarch64/a64fx
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-deucalion arch:aarch64/a64fx

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New job on instance eessi-bot-deucalion for CPU micro-architecture aarch64-a64fx for repository eessi.io-2023.06-software in job dir /home/eessibot/new-bot/jobs/2025.08/pr_64/518364

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Aug 19 10:37:34 UTC 2025 released job awaits launch by Slurm scheduler
Aug 19 10:38:37 UTC 2025 running job 518364 is running
Aug 19 11:35:15 UTC 2025 finished
😁 SUCCESS (click triangle for details)
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✅ job output file slurm-518364.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-a64fx-1755603017-0.tar.gzsize: 0 MiB (23094 bytes)
entries: 2
modules under 2023.06/software/linux/aarch64/a64fx/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/a64fx/software
no software packages in tarball
reprod directories under 2023.06/software/linux/aarch64/a64fx/reprod
no reprod directories in tarball
other under 2023.06/software/linux/aarch64/a64fx
.lmod/SitePackage.lua
2023.06/init/easybuild/eb_hooks.py
Aug 19 11:35:15 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ SKIP ] (1/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] (2/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] (3/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] (4/9) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ OK ] (5/9) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_a64fx+default
P: perf: 583.172 timesteps/s (r:0, l:None, u:None)
[ OK ] (6/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_a64fx+default
P: latency: 1.66 us (r:0, l:None, u:None)
[ OK ] (7/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_a64fx+default
P: latency: 1.71 us (r:0, l:None, u:None)
[ OK ] (8/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_a64fx+default
P: bandwidth: 8864.87 MB/s (r:0, l:None, u:None)
[ OK ] (9/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_a64fx+default
P: bandwidth: 8657.76 MB/s (r:0, l:None, u:None)
[ PASSED ] Ran 5/9 test case(s) from 9 check(s) (0 failure(s), 4 skipped, 0 aborted)
Details
✅ job output file slurm-518364.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
Aug 19 12:27:03 UTC 2025 uploaded transfer of eessi-2023.06-software-linux-aarch64-a64fx-1755603017-0.tar.gz to S3 bucket succeeded

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New job on instance eessi-bot-deucalion for CPU micro-architecture aarch64-a64fx for repository eessi.io-2025.06-software in job dir /home/eessibot/new-bot/jobs/2025.08/pr_64/518365

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Aug 19 10:36:39 UTC 2025 submitted job id 518365 awaits release by job manager
Aug 19 10:37:31 UTC 2025 released job awaits launch by Slurm scheduler
Aug 19 10:38:40 UTC 2025 running job 518365 is running
Aug 19 10:43:59 UTC 2025 finished
😁 SUCCESS (click triangle for details)
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✅ job output file slurm-518365.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2025.06-software-linux-aarch64-a64fx-1755600047-0.tar.gzsize: 0 MiB (26900 bytes)
entries: 4
modules under 2025.06/software/linux/aarch64/a64fx/modules/all
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software under 2025.06/software/linux/aarch64/a64fx/software
no software packages in tarball
reprod directories under 2025.06/software/linux/aarch64/a64fx/reprod
no reprod directories in tarball
other under 2025.06/software/linux/aarch64/a64fx
.lmod/SitePackage.lua
2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
Aug 19 10:43:59 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-518365.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
Aug 19 12:27:11 UTC 2025 uploaded transfer of eessi-2025.06-software-linux-aarch64-a64fx-1755600047-0.tar.gz to S3 bucket succeeded

@boegel boegel marked this pull request as draft August 19, 2025 12:26
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boegel commented Aug 19, 2025

I marked this as draft, just to make clear that this shouldn't be merged (same changes + easystack file used to trigger rebuilds are included in #59, which will be merged)

@boegel boegel mentioned this pull request Aug 19, 2025
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casparvl commented Aug 20, 2025

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:zen2
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:zen3
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:zen4
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:skylake_avx512
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:haswell
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:icelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:cascadelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:sapphirerapids
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:x86_64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:aarch64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:neoverse_n1
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws arch:neoverse_v1
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-deucalion architecture:aarch64/a64fx
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-jsc architecture:aarch64/nvidia/grace

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✅ job output file slurm-518850.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2025.06-software-linux-aarch64-a64fx-17556737840.tar.gzsize: 0 MiB (26909 bytes)
entries: 4
modules under 2025.06/software/linux/aarch64/a64fx/modules/all
no module files in tarball
software under 2025.06/software/linux/aarch64/a64fx/software
no software packages in tarball
reprod directories under 2025.06/software/linux/aarch64/a64fx/reprod
no reprod directories in tarball
other under 2025.06/software/linux/aarch64/a64fx
.lmod/SitePackage.lua
2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
Aug 20 07:11:10 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-518850.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

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✅ job output file slurm-14005015.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
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eessi-2025.06-software-linux-aarch64-nvidia-grace-17556737750.tar.gzsize: 0 MiB (26903 bytes)
entries: 4
modules under 2025.06/software/linux/aarch64/nvidia/grace/modules/all
no module files in tarball
software under 2025.06/software/linux/aarch64/nvidia/grace/software
no software packages in tarball
reprod directories under 2025.06/software/linux/aarch64/nvidia/grace/reprod
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other under 2025.06/software/linux/aarch64/nvidia/grace
2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
.lmod/SitePackage.lua
Aug 20 07:10:55 UTC 2025 test result
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Reason
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Details
✅ job output file slurm-14005015.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-haswell for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84250

date job status comment
Aug 20 07:08:46 UTC 2025 submitted job id 84250 awaits release by job manager
Aug 20 07:10:08 UTC 2025 released job awaits launch by Slurm scheduler
Aug 20 07:11:16 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-84250.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2025.06-software-linux-x86_64-intel-haswell-17556738160.tar.gzsize: 0 MiB (26888 bytes)
entries: 4
modules under 2025.06/software/linux/x86_64/intel/haswell/modules/all
no module files in tarball
software under 2025.06/software/linux/x86_64/intel/haswell/software
no software packages in tarball
reprod directories under 2025.06/software/linux/x86_64/intel/haswell/reprod
no reprod directories in tarball
other under 2025.06/software/linux/x86_64/intel/haswell
2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
.lmod/SitePackage.lua
Aug 20 07:11:16 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-84250.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

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eessi-bot-aws bot commented Aug 20, 2025 •
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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-icelake for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84251

date job status comment
Aug 20 07:08:50 UTC 2025 submitted job id 84251 awaits release by job manager
Aug 20 07:10:11 UTC 2025 released job awaits launch by Slurm scheduler

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eessi-bot-aws bot commented Aug 20, 2025 •
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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-cascadelake for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84252

date job status comment
Aug 20 07:08:54 UTC 2025 submitted job id 84252 awaits release by job manager
Aug 20 07:10:06 UTC 2025 released job awaits launch by Slurm scheduler

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eessi-bot-aws bot commented Aug 20, 2025 •
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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-sapphirerapids for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84253

date job status comment
Aug 20 07:08:58 UTC 2025 submitted job id 84253 awaits release by job manager
Aug 20 07:10:13 UTC 2025 released job awaits launch by Slurm scheduler

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eessi-bot-aws bot commented Aug 20, 2025 •
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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-generic for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84254

date job status comment
Aug 20 07:09:02 UTC 2025 submitted job id 84254 awaits release by job manager
Aug 20 07:10:03 UTC 2025 released job awaits launch by Slurm scheduler
Aug 20 07:11:14 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-84254.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2025.06-software-linux-x86_64-generic-17556738160.tar.gzsize: 0 MiB (26888 bytes)
entries: 4
modules under 2025.06/software/linux/x86_64/generic/modules/all
no module files in tarball
software under 2025.06/software/linux/x86_64/generic/software
no software packages in tarball
reprod directories under 2025.06/software/linux/x86_64/generic/reprod
no reprod directories in tarball
other under 2025.06/software/linux/x86_64/generic
2025.06/init/easybuild/eb_hooks.py
2025.06/scripts/gpu_support/nvidia/install_cuda_and_libraries.sh
2025.06/scripts/gpu_support/nvidia/install_cuda_host_injections.sh
.lmod/SitePackage.lua
Aug 20 07:11:14 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-84254.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

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eessi-bot-aws bot commented Aug 20, 2025 •
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New job on instance eessi-bot-mc-aws for CPU micro-architecture aarch64-generic for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84255

date job status comment
Aug 20 07:09:06 UTC 2025 submitted job id 84255 awaits release by job manager
Aug 20 07:09:56 UTC 2025 released job awaits launch by Slurm scheduler

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eessi-bot-aws bot commented Aug 20, 2025 •
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New job on instance eessi-bot-mc-aws for CPU micro-architecture aarch64-neoverse_n1 for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84256

date job status comment
Aug 20 07:09:11 UTC 2025 submitted job id 84256 awaits release by job manager
Aug 20 07:09:58 UTC 2025 released job awaits launch by Slurm scheduler

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eessi-bot-aws bot commented Aug 20, 2025 •
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New job on instance eessi-bot-mc-aws for CPU micro-architecture aarch64-neoverse_v1 for repository eessi.io-2025.06-software in job dir /project/def-users/SHARED/jobs/2025.08/pr_64/84257

date job status comment
Aug 20 07:09:14 UTC 2025 submitted job id 84257 awaits release by job manager
Aug 20 07:10:01 UTC 2025 released job awaits launch by Slurm scheduler

@casparvl
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casparvl commented Aug 20, 2025

Hmmm, now we'll get a mix of tarball names, with and without -0 suffix. All of hose would get deployed. I'll close this PR, recreate it, and do a new set of builds

@casparvl casparvl closed this Aug 20, 2025
@casparvl
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casparvl commented Aug 20, 2025

Replaced by #68

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boegel commented Aug 20, 2025

Note: tarball names were incorrect due to bug fix in #65 + #67

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@casparvl @boegel