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Commits on Apr 12, 2023

Major update: nextflow DSL1 - >DSL2
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Commits on Apr 19, 2023

docs: update README for current version
yuxuanlan
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Commits on Apr 20, 2023

docs: update README, add preprocessing section
yuxuanlan
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Commits on Dec 14, 2023

Commits on Sep 16, 2024

fix: move all process outputs to qc_dir/$plate_id, expect quantification
yuxuanlan
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feat: load sample.csv for input fastq reads (format: sampleId,R1,R2). Now fastq name is represented as sampleID everywhere in the pipeline output, including kallisto_quant dir and tsv files.
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doc: add sample.csv instruction.
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