Analysis Visualization

assembly_analysis.ipynb

Assembly calculation analysis, using data from assembly_Calcs* code stored in Data/AssemblyValues/.

bipartite_network_analysis.ipynb

Network statistics from bipartite subgraphs. Uses data stored in Data/NetworkStats/

cpd_similarity.ipynb

Experimental analysis - testing to see if there is a significant similarity between compounds which are highly used within the SureChemBL dataset (measured by degree). Uses data stored in /Cpd_Data/

network_analysis.ipynb

Contains preliminary preferential attachment graphing analysis, and eventually degree distribution analysis. Preferential attachment data is stored in pref_attach_dict* and Degrees\

occurance_viz.ipynb

Power-law analysis of compound frequency within patents.

pref_attachment_analysis.ipynb

Further preferential attachment analysis, based on network data. Data can be found in pref_attach_dict* and Data/Degrees/

pref_attachment_noNetworks.ipynb

Final preferential attachment coding, attachment value distriburions, and tracking attachment indicies of compounds.