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2 changes: 1 addition & 1 deletion .github/workflows/CompatHelper.yml
Original file line number Diff line number Diff line change
Expand Up @@ -46,5 +46,5 @@ jobs:
- uses: actions/checkout@v4
with:
ref: 'keepalive' # The branch, tag or SHA to checkout.
- uses: bgctw/keepalive-workflow@master
- uses: earthyscience/keepalive-workflow@master

18 changes: 9 additions & 9 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
# Bigleaf

[![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://bgctw.github.io/Bigleaf.jl/stable)
[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://bgctw.github.io/Bigleaf.jl/dev)
[![Build Status](https://github.com/bgctw/Bigleaf.jl/workflows/CI/badge.svg)](https://github.com/bgctw/Bigleaf.jl/actions)
[![Coverage](https://codecov.io/gh/bgctw/Bigleaf.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/bgctw/Bigleaf.jl)
[![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://earthyscience.github.io/Bigleaf.jl/stable)
[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://earthyscience.github.io/Bigleaf.jl/dev)
[![Build Status](https://github.com/earthyscience/Bigleaf.jl/workflows/CI/badge.svg)](https://github.com/earthyscience/Bigleaf.jl/actions)
[![Coverage](https://codecov.io/gh/earthyscience/Bigleaf.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/earthyscience/Bigleaf.jl)


**Bigleaf.jl** is a partial Julia port of Jürgen Knauer's
Expand All @@ -29,20 +29,20 @@ using Pkg
Pkg.add("Bigleaf")
```

And then importet to the every Julia session by:
And then imported to every Julia session by:
```julia
using Bigleaf
```

## Usage
See the [Documentation](https://bgctw.github.io/Bigleaf.jl/dev/)
that includes a [walkthrough](https://bgctw.github.io/Bigleaf.jl/dev/walkthrough/).
See the [Documentation](https://earthyscience.github.io/Bigleaf.jl/dev/)
that includes a [walkthrough](https://earthyscience.github.io/Bigleaf.jl/dev/walkthrough/).

[Please report bugs or issues here](https://github.com/bgctw/Bigleaf.jl/issues)
[Please report bugs or issues here](https://github.com/earthyscience/Bigleaf.jl/issues)

## Package content
We are porting functionality of the [R package](https://bitbucket.org/juergenknauer/Bigleaf) as needed. Please
file an [issue](https://github.com/bgctw/Bigleaf.jl/issues) if you need a specific feature.
file an [issue](https://github.com/earthyscience/Bigleaf.jl/issues) if you need a specific feature.

At the current state we ported
- Meteorological variables
Expand Down
8 changes: 4 additions & 4 deletions docs/make.jl
Original file line number Diff line number Diff line change
Expand Up @@ -12,13 +12,13 @@ doctest(Bigleaf, manual = false)
makedocs(;
# modules=[Bigleaf], # uncomment to show warnings on non-included docstrings
authors="Thomas Wutzler <[email protected]>, Jürgen Knauer <[email protected]> and contributors",
#repo="https://github.com/bgctw/Bigleaf.jl/blob/{commit}{path}#{line}",
repo = Remotes.GitHub("bgctw", "Bigleaf.jl"),
#repo="https://github.com/earthyscience/Bigleaf.jl/blob/{commit}{path}#{line}",
repo = Remotes.GitHub("earthyscience", "Bigleaf.jl"),
sitename="Bigleaf.jl",
doctestfilters=[r".*Info.*"],
format=Documenter.HTML(;
prettyurls=get(ENV, "CI", "false") == "true",
canonical="https://bgctw.github.io/Bigleaf.jl",
canonical="https://earthyscience.github.io/Bigleaf.jl",
assets=String[],
),
pages=[
Expand All @@ -43,6 +43,6 @@ makedocs(;
)

deploydocs(;
repo="github.com/bgctw/Bigleaf.jl",
repo="github.com/earthyscience/Bigleaf.jl",
devbranch="main",
)
2 changes: 1 addition & 1 deletion docs/src/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ CurrentModule = Bigleaf
```

# Bigleaf
Documentation for [Bigleaf](https://github.com/bgctw/Bigleaf.jl).
Documentation for [Bigleaf](https://github.com/earthyscience/Bigleaf.jl).

```@contents
Pages = ["index.md",]
Expand Down
2 changes: 1 addition & 1 deletion docs/src/walkthrough.md
Original file line number Diff line number Diff line change
Expand Up @@ -41,7 +41,7 @@ from the `bigleaf`
[R package](https://bitbucket.org/juergenknauer/Bigleaf/) repository and contains
half-hourly data of meteorological and flux measurements made in June 2014. For loading the
RData into Julia, see the
[source](https://github.com/bgctw/Bigleaf.jl/blob/main/docs/src/walkthrough.md?plain=1#L26)
[source](https://github.com/earthyscience/Bigleaf.jl/blob/main/docs/src/walkthrough.md?plain=1#L26)
of this file. We give the data.frame a shorter name here and create a timestamp.

```@example doc
Expand Down
2 changes: 1 addition & 1 deletion src/surface_roughness.jl
Original file line number Diff line number Diff line change
Expand Up @@ -188,7 +188,7 @@ function roughness_parameters(method::Roughness_wind_profile,
# zr, d, Tair, pressure, ustar, H; stab_formulation, constants)).psi_m
psi_m = getindex.(stability_correction.(
zr, d, Tair, pressure, ustar, H; stab_formulation, constants), :psi_m)
# https://discourse.julialang.org/t/eltype-changed-during-broadcast-with-missing/71312?u=bgctw
# https://discourse.julialang.org/t/eltype-changed-during-broadcast-with-missing/71312?u=earthyscience
res_eltype = Union{eltype(ustar),eltype(wind),eltype(Tair),eltype(pressure),eltype(H)}
psi_m = convert(Vector{res_eltype}, psi_m)::Vector{res_eltype}
rp = roughness_parameters(method, ustar, wind, psi_m; zh, zr, d, constants, kwargs...)
Expand Down
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