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2.5.0

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@pchaumeil pchaumeil released this 08 Sep 05:30
· 33 commits to master since this release
2.5.0
3e65722
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Bug Fixes:

  • (#644 , #641) Fixed compatibility with recent versions of NumPy (≥1.24), which removed the tostring() method from numpy.ndarray.

Minor Changes:

  • (#650) Update CLI with an up-to-date taxon.

Major Changes:

  • GTDB-Tk now uses Skani exclusively for genome clustering, replacing the previous Mash/Skani hybrid approach. This change simplifies the CLI and removes the dependency on Mash, streamlining installation and execution.
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