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Apm app#544

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mkuehbach wants to merge 23 commits intomasterfrom
apm_app
Closed

Apm app#544
mkuehbach wants to merge 23 commits intomasterfrom
apm_app

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@mkuehbach mkuehbach commented Feb 7, 2025 •
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  • Apm app tools #543 should be merged in here first, thereafter
  • This apm_app branch should merge the latest changes of the no_inner_section branch (currently parallel devs, see No inner sections #525 !)
  • Then all tests on the apm_app need to be used with pynxtools-apm and these test repeated
  • When No inner sections #525 has been merged finally this PR can be merged
  • Then a new pynxtools release and pynxtools-apm v0.3 release is required

sanbrock and others added 23 commits January 10, 2025 22:38
@sanbrock
use pynxtools.nomad.schema.Root
36a121e
@sanbrock
not using inner sections
c1bc7d5
@sanbrock
fix for doc links if name contains _
fc5b95b
@sanbrock
fix format
bfce048
@sanbrock
linting
274e0d6
@sanbrock
fixing tests
27fa71c
@sanbrock
fixing mime-type for WSL
8fb4953
@sanbrock
fix for handling raw files in subdirectories
bd22578
@atomprobe-tc
Version tracking feature branch to enable usage of specifically custo…
eb07601 
…mized NeXus definitions for the development of the atom probe app in NOMAD
@atomprobe-tc
Updated definitions and modifications on pyproject to prevent the unc…
53cf7e3 
…ontrolled side effect that urllib3 gets updated which generates incompatibilities with elasticsearch on the nomad side
@atomprobe-tc
Moved deps urllib3 and filelock to a nomad set of deps such that thes…
e124ccd 
…e get not modified when installing pynxtools in a current nomad environment, tested with 029fb04d239203cff90e4e
@atomprobe-tc
NXapm updates
018f834
@atomprobe-tc
Bumping ruff to 0.9.3
8b0ea2a
@atomprobe-tc
Edits in reply to how cameca example get parsed in NOMAD
8a213a4
@atomprobe-tc
edit defs
f8b341e
@atomprobe-tc
Updated defs
12d2aad
@atomprobe-tc
Updated defs for event records
9ab43ba
@atomprobe-tc
updated defs, instrument type
55912f9
@atomprobe-tc
Added an example based on @GinzburgLev and @sanbrock how to debug the…
fc1434c 
… pynxtools nomad parser plugin for a nomad parse command line session with some file
@atomprobe-tc
Using the refactored NXapm that might break current pynxtools-apm parser
5fd21c4
@atomprobe-tc
Fixes of NOMAD APM example
77f9a9a
@atomprobe-tc
Map NX_POSINT and NX_UINT to m_int64
7b117d2
@atomprobe-tc
run_number a countable
2768771
This was referenced Feb 7, 2025
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mkuehbach commented Mar 24, 2025

Closed in favor for #597

@mkuehbach mkuehbach closed this Mar 24, 2025
@lukaspie lukaspie deleted the apm_app branch March 26, 2025 10:59
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3 participants

@mkuehbach @sanbrock @atomprobe-tc