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Change default format of tile-space HISTORY output to nc4 #144

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Merged
gmao-rreichle merged 6 commits into from
Nov 25, 2025
Merged

Change default format of tile-space HISTORY output to nc4 #144

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26dda41
test history
weiyuan-jiang Oct 3, 2025
6932cf1
Merge branch 'develop' into feature/wjiang/Tile_nc4
gmao-rreichle Nov 20, 2025
d21eab1
in HISTORY templates, change binary diagnostic output to nc4 (except …
gmao-rreichle Nov 21, 2025
b227940
in HISTORY templates, change binary diagnostic output to nc4 for incr…
gmao-rreichle Nov 21, 2025
bcfba7e
edited CHANGELOG.md
gmao-rreichle Nov 21, 2025
1cc676d
remove tile_bin2nc4.F90
gmao-rreichle Nov 21, 2025
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3 changes: 2 additions & 1 deletion CHANGELOG.md
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Expand Up @@ -18,7 +18,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

- Cleaned up ldas_setup. Split out ldas.py and setup_utils.py.
- Added reader for surface meteorological forcing from S2S-3.
- Update `GEOSlandassim_GridComp/io_hdf5.F90` to allow for use with HDF5 1.14
- Update `GEOSlandassim_GridComp/io_hdf5.F90` to allow for use with HDF5 1.14.
- Changed default format of tile-space HISTORY output to nc4.

### Fixed

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5 changes: 0 additions & 5 deletions GEOSldas_App/CMakeLists.txt
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Expand Up @@ -9,11 +9,6 @@ ecbuild_add_executable (
SOURCES preprocess_ldas.F90 preprocess_ldas_routines.F90
LIBS GEOSldas_GridComp MAPL)

ecbuild_add_executable (
TARGET tile_bin2nc4.x
SOURCES tile_bin2nc4.F90
LIBS MAPL)

ecbuild_add_executable (
TARGET mwrtm_bin2nc4.x
SOURCES util/inputs/mwRTM_params/mwrtm_bin2nc4.F90
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56 changes: 22 additions & 34 deletions GEOSldas_App/GEOSldas_HIST.rc
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Expand Up @@ -13,7 +13,6 @@ EXPID: GEOSldas_expid
# pre-defined Collections

COLLECTIONS:
#OUT1d 'tavg24_1d_lfs_Nt'
#OUT2d 'tavg24_2d_lfs_Nx'
#OUT1d 'tavg24_1d_lnd_Nt'
#OUT2d 'tavg24_2d_lnd_Nx'
Expand Down Expand Up @@ -68,32 +67,14 @@ EASEv2_M36.LM: 1
# with "gzip"; nc4 files can be compressed using the "compress_bit-shaved_nc4.sh"
# utility script.

tavg24_1d_lfs_Nt.descr: 'Tile-space,Daily,Time-Averaged,Single-Level,Assimilation,Land Surface Forcings and States',
tavg24_1d_lfs_Nt.nbits: 12,
tavg24_1d_lfs_Nt.template: '%y4%m2%d2_%h2%n2z.bin',
tavg24_1d_lfs_Nt.archive: '%c/Y%y4',
tavg24_1d_lfs_Nt.mode: 'time-averaged',
tavg24_1d_lfs_Nt.frequency: 240000,
tavg24_1d_lfs_Nt.ref_time: 000000,
tavg24_1d_lfs_Nt.fields:'Tair' , 'METFORCE' ,
'Qair' , 'METFORCE' ,
'LWdown' , 'METFORCE' ,
'SWdown' , 'METFORCE' ,
'Wind' , 'METFORCE' ,
'Psurf' , 'METFORCE' ,
'Rainf_C' , 'METFORCE' ,
'Rainf' , 'METFORCE' ,
'Snowf' , 'METFORCE' ,
'RainfSnowf' , 'METFORCE' ,
'RefH' , 'METFORCE' ,
'CATDEF' , 'GridComp' ,
'RZEXC' , 'GridComp' ,
'SRFEXC' , 'GridComp' ,
'WESNN1' , 'GridComp' ,
'WESNN2' , 'GridComp' ,
'WESNN3' , 'GridComp' ,
'HLWUP' , 'GridComp' ,
::
# NOTE (Nov 2025):
# Changes for *1d* output with recent introduction of land+landice simulations:
# - Direct *1d* output to nc4 via MAPL.
# - Removed tile_bin2nc4.F90; no longer works for land-only collections in land+landice
# simulations because it uses tilecoord.bin, which contains info for all tiles.
# - Removed *1d* lfs collection; no longer works in land+landice simulations because of
# different tile spaces for CATCH and METFORCE.
#

tavg24_2d_lfs_Nx.descr: '2d,Daily,Time-Averaged,Single-Level,Assimilation,Land Surface Forcings and States',
tavg24_2d_lfs_Nx.nbits: 12,
Expand Down Expand Up @@ -129,8 +110,9 @@ EASEv2_M36.LM: 1

tavg24_1d_lnd_Nt.descr: 'Tile-space,Daily,Time-Averaged,Single-Level,Assimilation,Land Surface Diagnostics',
tavg24_1d_lnd_Nt.nbits: 12,
tavg24_1d_lnd_Nt.template: '%y4%m2%d2_%h2%n2z.bin',
tavg24_1d_lnd_Nt.template: '%y4%m2%d2_%h2%n2z.nc4',
tavg24_1d_lnd_Nt.mode: 'time-averaged',
tavg24_1d_lnd_Nt.format: 'CFIO',
tavg24_1d_lnd_Nt.frequency: 240000,
tavg24_1d_lnd_Nt.ref_time: 000000,
tavg24_1d_lnd_Nt.fields: 'GRN' , 'VEGDYN' ,
Expand Down Expand Up @@ -334,8 +316,9 @@ EASEv2_M36.LM: 1


const_1d_lnd_Nt.descr: 'Tile-space,Constant,Time-invariant,Single-Level,Assimilation,Land Surface Model Parameters',
const_1d_lnd_Nt.template: '%y4%m2%d2_%h2%n2z.bin',
const_1d_lnd_Nt.template: '%y4%m2%d2_%h2%n2z.nc4',
const_1d_lnd_Nt.mode: 'instantaneous',
const_1d_lnd_Nt.format: 'CFIO',
const_1d_lnd_Nt.frequency: 240000,
const_1d_lnd_Nt.ref_time: 000000,
const_1d_lnd_Nt.fields: 'DZGT1' , 'GridComp' ,
Expand Down Expand Up @@ -386,8 +369,9 @@ EASEv2_M36.LM: 1

SMAP_L4_SM_gph.descr: 'Tile-space,3-Hourly,Time-Averaged,Single-Level,Assimilation,SMAP L4_SM Land Geophysical Diagnostics',
SMAP_L4_SM_gph.nbits: 12,
SMAP_L4_SM_gph.template: '%y4%m2%d2_%h2%n2z.bin',
SMAP_L4_SM_gph.template: '%y4%m2%d2_%h2%n2z.nc4',
SMAP_L4_SM_gph.mode: 'time-averaged',
SMAP_L4_SM_gph.format: 'CFIO',
SMAP_L4_SM_gph.frequency: 030000,
SMAP_L4_SM_gph.ref_time: 000000,
SMAP_L4_SM_gph.fields: 'WCSF' , 'ENSAVG' , 'sm_surface' ,
Expand Down Expand Up @@ -437,8 +421,9 @@ EASEv2_M36.LM: 1

inst1_1d_lnr_Nt.descr: 'Tile-space,1-Hourly,Instantaneous,Single-Level,Assimilation,Land Nature Run Diagnostics',
inst1_1d_lnr_Nt.nbits: 12,
inst1_1d_lnr_Nt.template: '%y4%m2%d2_%h2%n2z.bin' ,
inst1_1d_lnr_Nt.template: '%y4%m2%d2_%h2%n2z.nc4' ,
inst1_1d_lnr_Nt.mode: 'instantaneous' ,
inst1_1d_lnr_Nt.format: 'CFIO',
inst1_1d_lnr_Nt.frequency: 010000 ,
inst1_1d_lnr_Nt.ref_time: 000000,
inst1_1d_lnr_Nt.fields: 'TPSURF' , 'ENSAVG' , 'surface_temp' ,
Expand All @@ -453,8 +438,9 @@ EASEv2_M36.LM: 1
# By default, no bit shaving for increments output.

catch_progn_incr.descr: 'Tile-space,3-Hourly,Instantaneous,Single-Level,Assimilation,Ensemble-Average Land Prognostics Increments',
catch_progn_incr.template: '%y4%m2%d2_%h2%n2z.bin',
catch_progn_incr.template: '%y4%m2%d2_%h2%n2z.nc4',
catch_progn_incr.mode: 'instantaneous',
catch_progn_incr.format: 'CFIO',
catch_progn_incr.frequency: 030000,
catch_progn_incr.ref_time: 000000,
catch_progn_incr.fields: 'TCFSAT_INCR' , 'LANDASSIM' ,
Expand Down Expand Up @@ -491,8 +477,9 @@ EASEv2_M36.LM: 1

inst3_1d_lndfcstana_Nt.descr: 'Tile-space,3-Hourly,Instantaneous,Single-Level,Assimilation,Ensemble Land Forecast and Analysis Diagnostics',
inst3_1d_lndfcstana_Nt.nbits: 12,
inst3_1d_lndfcstana_Nt.template: '%y4%m2%d2_%h2%n2z.bin',
inst3_1d_lndfcstana_Nt.template: '%y4%m2%d2_%h2%n2z.nc4',
inst3_1d_lndfcstana_Nt.mode: 'instantaneous',
inst3_1d_lndfcstana_Nt.format: 'CFIO',
inst3_1d_lndfcstana_Nt.frequency: 030000,
inst3_1d_lndfcstana_Nt.ref_time: 000000,
inst3_1d_lndfcstana_Nt.fields: 'WCSF' , 'ENSAVG' , 'SFMC_FCST' ,
Expand Down Expand Up @@ -601,8 +588,9 @@ EASEv2_M36.LM: 1

tavg24_1d_glc_Nt.descr: 'Tile-space,Daily,Time-Averaged,Single-level,Land Ice Diagnostics',
tavg24_1d_glc_Nt.nbits: 12,
tavg24_1d_glc_Nt.template: '%y4%m2%d2_%h2%n2z.bin' ,
tavg24_1d_glc_Nt.template: '%y4%m2%d2_%h2%n2z.nc4' ,
tavg24_1d_glc_Nt.mode: 'time-averaged' ,
tavg24_1d_glc_Nt.format: 'CFIO',
tavg24_1d_glc_Nt.frequency: 240000 ,
tavg24_1d_glc_Nt.ref_time: 000000 ,
tavg24_1d_glc_Nt.fields: 'ASNOW_GL' , 'LANDICE' ,
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6 changes: 4 additions & 2 deletions GEOSldas_App/GEOSldas_HISTdet.rc
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Expand Up @@ -37,8 +37,9 @@ PC576x361-DC.LM: 1


catch_progn_incr.descr: 'Tile-space,3-Hourly,Instantaneous,Single-Level,Assimilation,Ensemble-Average Land Prognostics Increments',
catch_progn_incr.template: '%y4%m2%d2_%h2%n2z.bin',
catch_progn_incr.template: '%y4%m2%d2_%h2%n2z.nc4',
catch_progn_incr.mode: 'instantaneous',
catch_progn_incr.format: 'CFIO',
catch_progn_incr.frequency: 030000,
catch_progn_incr.ref_time: 013000,
catch_progn_incr.fields: 'TCFSAT_INCR' , 'LANDASSIM' ,
Expand Down Expand Up @@ -70,8 +71,9 @@ catch_progn_incr.fields: 'TCFSAT_INCR' , 'LANDASSIM' ,

tavg3_1d_lnd_Nt.descr: 'Tile-space,Time-Averaged,Single-Level,Assimilation,Land Surface Diagnostics',
tavg3_1d_lnd_Nt.nbits: 12,
tavg3_1d_lnd_Nt.template: '%y4%m2%d2_%h2%n2z.bin',
tavg3_1d_lnd_Nt.template: '%y4%m2%d2_%h2%n2z.nc4',
tavg3_1d_lnd_Nt.mode: 'time-averaged',
tavg3_1d_lnd_Nt.format: 'CFIO',
tavg3_1d_lnd_Nt.frequency: 030000,
tavg3_1d_lnd_Nt.ref_time: 013000,
tavg3_1d_lnd_Nt.fields: 'WET3' , 'ENSAVG' , 'GWETPROF' ,
Expand Down
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