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2022-09-18_add_asterisks_to_proteaseassayanalysis
2022-09-18_add_asterisks_to_proteaseassayanalysis
 
 
INPUT
INPUT
 
 
OBJECTS
OBJECTS
 
 
OUTPUT
OUTPUT
 
 
.DS_Store
.DS_Store
 
 
.Rhistory
.Rhistory
 
 
.gitattributes
.gitattributes
 
 
2021_06_03-Truncs.csv
2021_06_03-Truncs.csv
 
 
MAIN_IPCD-analysis.R
MAIN_IPCD-analysis.R
 
 
analyze_seqs.R
analyze_seqs.R
 
 
countmutantsGAMMA.R
countmutantsGAMMA.R
 
 
fig1-full.png
fig1-full.png
 
 
fig2-full.png
fig2-full.png
 
 
gammaalldata.csv
gammaalldata.csv
 
 
mutationcleanup.R
mutationcleanup.R
 
 
nucleotide.R
nucleotide.R
 
 
parse_inputs.R
parse_inputs.R
 
 
parse_metadata.R
parse_metadata.R
 
 
process_inputs.R
process_inputs.R
 
 
proteinvenn-full.png
proteinvenn-full.png
 
 
visualize_data_overview.R
visualize_data_overview.R
 
 
visualize_distances.R
visualize_distances.R
 
 

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Code for O'Connor et al., 2022: https://www.biorxiv.org/content/biorxiv/early/2022/07/27/2021.02.22.432365.full.pdf

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