0.1.14-dev2

What's Changed

• feat: get cds overlap given chromosome, start, + stop by @korikuzma in #217

Full Changelog: v0.1.14-dev1...0.1.14-dev2

0.3.0-dev1

What's Changed

• build: properly pin pydantic v2 major version by @korikuzma in #215

Full Changelog: 0.3.0-dev0...0.3.0-dev1

0.3.0-dev0

What's Changed

• cicd: update release.yaml (publish python distribution to pypi) by @korikuzma in #197
• refactor!: rearrange app architecture by @korikuzma in #196
• refactor: use ResidueMode for residue_mode type by @korikuzma in #199
• style: use ruff + black by @korikuzma in #200
• refactor: use AnnotationLayer enum by @korikuzma in #203
• build: replace pandas with polars (#178) by @korikuzma in #205
• refactor!: Update TranscriptPriority enum by @korikuzma in #201
• feat: make positions optional in get_transcripts_from_gene by @katiestahl in #210
• refactor!: get_gene_mane_data sorted by desc MANE_Status by @korikuzma in #213
• build: pin pydantic to v2 major version by @korikuzma in #214
• feat!: create method for GRCh38 to MANE protein representation by @korikuzma in #211

New Contributors

• @katiestahl made their first contribution in #210

Full Changelog: 0.2.0-dev0...0.3.0-dev0

0.2.0-dev0

What's Changed

• build: update pydantic to v2 and remove GeneNormalizer class by @korikuzma in #189

Full Changelog: v0.1.14-dev1...0.2.0-dev0

v0.1.14-dev1

What's Changed

• build: use standard lib urlparse by @jsstevenson in #181
• chore: clean up some type annotations by @jsstevenson in #183
• fix: update FASTA header format by @jsstevenson in #182

Full Changelog: v0.1.14-dev0...v0.1.14-dev1

v0.1.14-dev0

What's Changed

• refactor: update to lastest version of gene-normalizer by @korikuzma in #146
• fix: MANE Summary data >= v1.1 updated GRCh38_chr by @korikuzma in #149
• fix: MANE Summary data >= v1.1 updated GRCh38_chr by @jsstevenson in #153
• build: remove reqs.txt files by @jsstevenson in #154
• merge staging by @jsstevenson in #155
• fix: ensure stable imports by @jsstevenson in #156
• fix: MANETranscriptError in get_mapped_mane_data by @korikuzma in #160
• feat: clean up file download behavior and descriptions by @jsstevenson in #163
• feat!: remove separate UTA password param by @jsstevenson in #166
• revert: support for LRG sequences by @korikuzma in #175

Full Changelog: 0.1.13...v0.1.14-dev0

0.1.13

What's Changed

• fix: MANE Summary data >= v1.1 updated GRCh38_chr by @korikuzma in #150

Full Changelog: 0.1.12...0.1.13

0.1.12

What's Changed

• refactor: update to lastest version of gene-normalizer by @korikuzma in #146

Full Changelog: 0.1.11...0.1.12

0.1.11

What's Changed

• refactor: add back UTADatabase.liftover_38_to_37 by @korikuzma in #143

Full Changelog: 0.1.10...0.1.11

0.1.10

What's Changed

• feat: allow user to provide own chain file for pyliftover by @korikuzma in #136
• refactor!: SeqRepoAccess extends vrs-python's SeqRepoDataProxy class by @korikuzma in #138
• build: update dependencies by @korikuzma in #139
• refactor: remove unused instance variables by @korikuzma in #141

Full Changelog: v0.1.9...0.1.10