MEDI 0.2.1

This is a hotfix to circumvent the unannounced renaming of several ranks in the NCBI taxonomy.

MEDI 0.2.0

This uses the Nextflow built-in collate for batching now with a nicer Kraken2 wrapper. Also ensures the Kraken step is batched.

Improved documentation.

kraken2-report was compiled against a newer libc now.

Some linting fixes.

Adds duration defaults to several workflows steps.

MEDI 0.1.0

This tags the state of the repository at the time of publication.