Integrating freemuxlet results? #2301
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leetde
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Hello, I wanted to see if anyone knew the answer to this? |
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Hello, I demultiplexed my cells using Freemuxlet (thus the output file is [prefix].clust1.samples.gz rather than [prefix].best. Can I still use the AddDemuxletResults function as in https://www.archrproject.com/bookdown/using-demuxlet-with-archr.html to add the columns for freemuxlet multiplet calls and the sample ID? These columns are also named DROPLET.TYPE and BEST.GUESS in the clust1.samples.gz output, as you can see here: https://github.com/statgen/popscle. thanks!
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