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4 changes: 4 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -13,6 +13,10 @@ of options for reading and writing 3D imaging data.
The final write-up can be found at
[https://heftieproject.github.io/zarr-benchmarks/](https://heftieproject.github.io/zarr-benchmarks/).

This is based on the results in the `/example_results` directory. To re-create
all plots locally (inside `data/plots`), follow the installation instructions
below then run: `python src/zarr_benchmarks/create_plots.py --example_results`.

## Other related work

- [`zarr-developers/zarr-benchmark`](https://github.com/zarr-developers/zarr-benchmark)
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8 changes: 4 additions & 4 deletions docs/index.md
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Expand Up @@ -30,7 +30,7 @@ These benchmarks are part of the wider
increase compression ratio:
- image data, setting it to `"shuffle"`
- sparse labels, setting it to `"bitshuffle"`
- dense labels not setting `shuffle` at all
- dense labels, not setting `shuffle` at all

## Configuration

Expand Down Expand Up @@ -142,9 +142,9 @@ tensorstore library).
![Shuffle vs write time with a shorter write time for shuffle than for no shuffle](assets/shuffle_write.png)

Setting the _shuffle_ configuration to "shuffle" increases the compression ratio
for imagaing data from ~1.5 to ~1.9, and does not substatially change the read
or write times. We found that different shuffle options have different outcomes
for different types of data however.
for imaging data from ~1.5 to ~1.9, and does not substatially change the read or
write times. We found that different shuffle options have different outcomes for
different types of data however.

### Chunk size

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