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README.md
@@ -38,7 +38,7 @@ import pandas as pd
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import ovrlpy
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# define ovrlpy analysis parameters
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-n_components = 20
+n_components = 20 # number pf PCA components
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# load the data
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coordinate_df = pd.read_csv('path/to/coordinate_file.csv')
@@ -90,7 +90,7 @@ doublet_to_show = 0
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x, y = doublets["x", "y"].row(doublet_to_show)
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-fig = ovrlpy.plot_region_of_interest(dataset, x, y, window_size=window_size)
+fig = ovrlpy.plot_region_of_interest(dataset, x, y, window_size=50)
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```
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