Z-Hunt

website for online version - http://zhunt.bmb.colostate.edu

An algorithm for predicting the propensity of DNA to flip from the B-form to the Z-form.

Quick Start

./bin/zhunt

Compiling from Source

Compile using gcc compiler:

make all

Python Code

Within scripts, zhunt.py is compatible with Python2.7. Future development will make it Python3 compatable. After zhunt compilation as described above, create a directory and place the python script with the target .fasta file.

python zhunt.py

A GUI will pop-up for you to select your desired .fasta file as well as a section for your email address (future developmet). Select submit. The run will output a file <yourfilename.fasta.Z-score> that can be read in a text editor or imported into Excel.

Authors

• Shing Ho - Initial work - original publication

License

This project is licensed under the MIT License - see the LICENSE.md file for details