The pipeline consists of 4 steps and is run a slurm cluster. Each step in the pipeline consists a code snippet for analyzing one sample, and a script for running the analysis on all the samples.
If you have any questions about this project, please contact us at tagkopouloslab@ucdavis.edu
See the LICENSE file for license rights and limitations (Apache2.0).
This work was supported by the National Institutes of Health (Grant Number NIEHS P42 ES004699).