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10,808 changes: 10,808 additions & 0 deletions dvc.lock

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3,330 changes: 3,183 additions & 147 deletions dvc.yaml

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45 changes: 44 additions & 1 deletion main.py
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Expand Up @@ -353,4 +353,47 @@
prediction = ips.analysis.Prediction(data=validation_data, model=model)
metrics = ips.analysis.PredictionMetrics(data=prediction)

project.build()

locality_constraints = {}
for atom_type in ["N", "C", "H", "F"]:
locality_constraints[atom_type] = []
for radius in [1, 2, 3, 4, 5, 6, 7, 8, 9]:
locality_constraints[atom_type].append(
ips.calculators.FixedSphereConstraint(
atom_id=0, radius=radius, atom_type=atom_type
)
)

locality_groups = []
for atom_type in locality_constraints:
with project.group("locality", atom_type) as group:
locality_groups.append(group)
md_list = []
dft_list = []
for constraint in locality_constraints[atom_type]:
md = ips.calculators.ASEMD(
data=geopt.atoms,
data_id=-1,
model=model,
thermostat=thermostat,
checker_list=[uncertainty_check],
constraint_list=[constraint],
steps=7000,
sampling_rate=1000,
)
md_list.append(md)

cp2k = ips.calculators.CP2KSinglePoint(
data=md.atoms,
cp2k_params="config/cp2k.yaml",
cp2k_files=["GTH_BASIS_SETS", "GTH_POTENTIALS", "dftd3.dat"],
cp2k_shell=cp2k_shell,
)
dft_list.append(cp2k)

analysis = ips.analysis.AnalyseSingleForceSensitivity(
data=dft_list,
sim_list=md_list,
)

project.build(nodes=locality_groups)
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