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Update dev branch#137
wong-hl wants to merge 455 commits intodevfrom
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@wong-hl wong-hl commented Jan 30, 2026

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wong-hl and others added 30 commits October 17, 2025 18:35
Also has tests to check that critical_success_index on 1D is equivalent to Jaccard
Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 4 to 5.
- [Release notes](https://github.com/actions/upload-artifact/releases)
- [Commits](actions/upload-artifact@v4...v5)

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Bumps [actions/download-artifact](https://github.com/actions/download-artifact) from 5 to 6.
- [Release notes](https://github.com/actions/download-artifact/releases)
- [Commits](actions/download-artifact@v5...v6)

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- dependency-name: actions/download-artifact
  dependency-version: '6'
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This was added as I wanted to know if the plots would provide insight as to whether the presence of ISSR is linked to the absence of turbulence etc
Bumps [h5netcdf](https://github.com/h5netcdf/h5netcdf) from 1.6.4 to 1.7.3.
- [Release notes](https://github.com/h5netcdf/h5netcdf/releases)
- [Changelog](https://github.com/h5netcdf/h5netcdf/blob/main/CHANGELOG.rst)
- [Commits](h5netcdf/h5netcdf@v1.6.4...v1.7.3)

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updated-dependencies:
- dependency-name: h5netcdf
  dependency-version: 1.7.3
  dependency-type: direct:production
  update-type: version-update:semver-minor
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Bumps [pandas-stubs](https://github.com/pandas-dev/pandas-stubs) from 2.3.0.250703 to 2.3.2.250926.
- [Changelog](https://github.com/pandas-dev/pandas-stubs/blob/main/docs/release_procedure.md)
- [Commits](pandas-dev/pandas-stubs@v2.3.0.250703...v2.3.2.250926)

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updated-dependencies:
- dependency-name: pandas-stubs
  dependency-version: 2.3.2.250926
  dependency-type: direct:production
  update-type: version-update:semver-patch
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Bumps [pyarrow](https://github.com/apache/arrow) from 21.0.0 to 22.0.0.
- [Release notes](https://github.com/apache/arrow/releases)
- [Commits](apache/arrow@apache-arrow-21.0.0...apache-arrow-22.0.0)

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updated-dependencies:
- dependency-name: pyarrow
  dependency-version: 22.0.0
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As I will have a contrails file, I think it makes sense to move it into a separate module. Also, the analysis can be shared and is more logical for it to live together there?????
Bumps [netcdf4](https://github.com/Unidata/netcdf4-python) from 1.7.2 to 1.7.3.
- [Release notes](https://github.com/Unidata/netcdf4-python/releases)
- [Changelog](https://github.com/Unidata/netcdf4-python/blob/master/Changelog)
- [Commits](https://github.com/Unidata/netcdf4-python/commits)

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  dependency-version: 1.7.3
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This method is used to find regions of ISSRs, turbulence or jetstreams. Each identified region has a number associate to it. This allows for a given point to be associated with a region
These checks will need to be reused by a later method. So, make them reusable
This method uses the boolean mask of the points which intersect to find the corresponding value in the labeled array. As all regions will have the same number, the unique values found from the mask can be used to find all values which match the identified regions.

Without the labeling, it will not be possible to find the parent region as the intersection would cause the information to be lost and there are an infinite number of permutations that could've resulted in that intersection pattern. Thus, by first adding the information about which region a point belongs to, it's possible to recover the parent regions
Bumps [typer](https://github.com/fastapi/typer) from 0.16.1 to 0.20.0.
- [Release notes](https://github.com/fastapi/typer/releases)
- [Changelog](https://github.com/fastapi/typer/blob/master/docs/release-notes.md)
- [Commits](fastapi/typer@0.16.1...0.20.0)

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- dependency-name: typer
  dependency-version: 0.20.0
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… this should never fail (#72)

On the HPC, this condition will fail on one specific configuration. As I'm not able to replicate the HPC set up locally, I've not been able to test it. However, I chanced upon a situaiton where this was replicated and found that for that case, flipping the condition fixed the issue.
Bumps [pyright](https://github.com/RobertCraigie/pyright-python) from 1.1.407 to 1.1.408.
- [Release notes](https://github.com/RobertCraigie/pyright-python/releases)
- [Commits](RobertCraigie/pyright-python@v1.1.407...v1.1.408)

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- dependency-name: pyright
  dependency-version: 1.1.408
  dependency-type: direct:development
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dependabot bot added 2 commits February 23, 2026 15:00
Bumps [pyarrow](https://github.com/apache/arrow) from 23.0.0 to 23.0.1.
- [Release notes](https://github.com/apache/arrow/releases)
- [Commits](apache/arrow@apache-arrow-23.0.0...apache-arrow-23.0.1)

---
updated-dependencies:
- dependency-name: pyarrow
  dependency-version: 23.0.1
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Bumps [geoviews](https://github.com/holoviz/geoviews) from 1.15.0 to 1.15.1.
- [Release notes](https://github.com/holoviz/geoviews/releases)
- [Changelog](https://github.com/holoviz/geoviews/blob/main/CHANGELOG.md)
- [Commits](holoviz/geoviews@v1.15.0...v1.15.1)

---
updated-dependencies:
- dependency-name: geoviews
  dependency-version: 1.15.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
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wong-hl and others added 3 commits February 23, 2026 17:13
Bumps [xarray](https://github.com/pydata/xarray) from 2025.12.0 to 2026.2.0.
- [Release notes](https://github.com/pydata/xarray/releases)
- [Commits](pydata/xarray@v2025.12.0...v2026.02.0)

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- dependency-name: xarray
  dependency-version: 2026.2.0
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Due to RuntimeError: Requested dask.distributed scheduler but no Client active
FEAT: Exports turbulence diagnostics to zarr and computes mathew's correlation between diagnostics
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