module url to path

packages/compare-images/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@itk-wasm/compare-images-build",
-  "version": "5.4.0",
+  "version": "5.4.1",
   "private": true,
   "description": "@itk-wasm/compare-stringify build configuration",
   "type": "module",

packages/compare-images/pixi.toml

@@ -1,5 +1,5 @@
-[project]
-authors = ["Matt McCormick <matt@mmmccormick.com>"]
+[workspace]
+authors = ["Matt McCormick <matt@fideus.io>"]
 channels = ["conda-forge"]
 description = "Compare images with a tolerance for regression testing."
 name = "compare-images"

packages/compare-images/python/itkwasm-compare-images-emscripten/itkwasm_compare_images_emscripten/_version.py

@@ -1 +1 @@
-__version__ = "5.4.0"
+__version__ = "5.4.1"

packages/compare-images/python/itkwasm-compare-images-wasi/itkwasm_compare_images_wasi/_version.py

@@ -1 +1 @@
-__version__ = "5.4.0"
+__version__ = "5.4.1"

packages/compare-images/python/itkwasm-compare-images/itkwasm_compare_images/_version.py

@@ -1 +1 @@
-__version__ = "5.4.0"
+__version__ = "5.4.1"

packages/compare-images/typescript/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@itk-wasm/compare-images",
-  "version": "5.4.0",
+  "version": "5.4.1",
   "description": "Compare images with a tolerance for regression testing.",
   "type": "module",
   "module": "./dist/index.js",

packages/compare-images/typescript/src/compare-double-images-node.ts

@@ -3,14 +3,15 @@ import {
   InterfaceTypes,
   PipelineOutput,
   PipelineInput,
-  runPipelineNode
-} from 'itk-wasm'
+  runPipelineNode,
+} from "itk-wasm";
 
-import CompareDoubleImagesOptions from './compare-double-images-options.js'
-import CompareDoubleImagesNodeResult from './compare-double-images-node-result.js'
-import CompareImagesMetric from './compare-images-metric.js'
+import CompareDoubleImagesOptions from "./compare-double-images-options.js";
+import CompareDoubleImagesNodeResult from "./compare-double-images-node-result.js";
+import CompareImagesMetric from "./compare-images-metric.js";
 
-import path from 'path'
+import path from "path";
+import { fileURLToPath } from "url";
 
 /**
  * Compare double pixel type images with a tolerance for regression testing.
@@ -22,86 +23,88 @@ import path from 'path'
  */
 async function compareDoubleImagesNode(
   testImage: Image,
-  options: CompareDoubleImagesOptions = { baselineImages: [] as Image[], }
-) : Promise<CompareDoubleImagesNodeResult> {
-
+  options: CompareDoubleImagesOptions = { baselineImages: [] as Image[] }
+): Promise<CompareDoubleImagesNodeResult> {
   const desiredOutputs: Array<PipelineOutput> = [
     { type: InterfaceTypes.JsonCompatible },
     { type: InterfaceTypes.Image },
     { type: InterfaceTypes.Image },
-  ]
+  ];
 
   const inputs: Array<PipelineInput> = [
     { type: InterfaceTypes.Image, data: testImage },
-  ]
+  ];
 
-  const args = []
+  const args = [];
   // Inputs
-  const testImageName = '0'
-  args.push(testImageName as string)
+  const testImageName = "0";
+  args.push(testImageName as string);
 
   // Outputs
-  const metricsName = '0'
-  args.push(metricsName)
+  const metricsName = "0";
+  args.push(metricsName);
 
-  const differenceImageName = '1'
-  args.push(differenceImageName)
+  const differenceImageName = "1";
+  args.push(differenceImageName);
 
-  const differenceUchar2dImageName = '2'
-  args.push(differenceUchar2dImageName)
+  const differenceUchar2dImageName = "2";
+  args.push(differenceUchar2dImageName);
 
   // Options
-  args.push('--memory-io')
+  args.push("--memory-io");
   if (typeof options.baselineImages !== "undefined") {
-    if(options.baselineImages.length < 1) {
-      throw new Error('"baseline-images" option must have a length > 1')
+    if (options.baselineImages.length < 1) {
+      throw new Error('"baseline-images" option must have a length > 1');
     }
-    args.push('--baseline-images')
+    args.push("--baseline-images");
 
     options.baselineImages.forEach((value) => {
-      const inputCountString = inputs.length.toString()
-      inputs.push({ type: InterfaceTypes.Image, data: value as Image })
-      args.push(inputCountString)
-
-    })
+      const inputCountString = inputs.length.toString();
+      inputs.push({ type: InterfaceTypes.Image, data: value as Image });
+      args.push(inputCountString);
+    });
   }
   if (typeof options.differenceThreshold !== "undefined") {
-    args.push('--difference-threshold', options.differenceThreshold.toString())
-
+    args.push("--difference-threshold", options.differenceThreshold.toString());
   }
   if (typeof options.radiusTolerance !== "undefined") {
-    args.push('--radius-tolerance', options.radiusTolerance.toString())
-
+    args.push("--radius-tolerance", options.radiusTolerance.toString());
   }
   if (typeof options.spatialTolerance !== "undefined") {
-    args.push('--spatial-tolerance', options.spatialTolerance.toString())
-
+    args.push("--spatial-tolerance", options.spatialTolerance.toString());
   }
   if (typeof options.numberOfPixelsTolerance !== "undefined") {
-    args.push('--number-of-pixels-tolerance', options.numberOfPixelsTolerance.toString())
-
+    args.push(
+      "--number-of-pixels-tolerance",
+      options.numberOfPixelsTolerance.toString()
+    );
   }
   if (typeof options.ignoreBoundaryPixels !== "undefined") {
-    options.ignoreBoundaryPixels && args.push('--ignore-boundary-pixels')
+    options.ignoreBoundaryPixels && args.push("--ignore-boundary-pixels");
   }
 
-  const pipelinePath = path.join(path.dirname(import.meta.url.substring(7)), 'pipelines', 'compare-double-images')
-
-  const {
-    returnValue,
-    stderr,
-    outputs
-  } = await runPipelineNode(pipelinePath, args, desiredOutputs, inputs)
+  const pipelinePath = path.join(
+    path.dirname(fileURLToPath(import.meta.url)),
+    "pipelines",
+    "compare-double-images"
+  );
+
+  const { returnValue, stderr, outputs } = await runPipelineNode(
+    pipelinePath,
+    args,
+    desiredOutputs,
+    inputs
+  );
   if (returnValue !== 0) {
-    throw new Error(stderr)
+    throw new Error(stderr);
   }
 
   const result = {
     metrics: outputs[0].data as unknown as CompareImagesMetric,
     differenceImage: outputs[1].data as Image,
     differenceUchar2dImage: outputs[2].data as Image,
-  }
-  return result
+  };
+  return result;
 }
 
-export default compareDoubleImagesNode
+export default compareDoubleImagesNode;

packages/dicom/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@itk-wasm/dicom-build",
-  "version": "7.6.3",
+  "version": "7.6.4",
   "private": true,
   "description": "@itk-wasm/dicom build configuration.",
   "type": "module",

packages/dicom/python/itkwasm-dicom-emscripten/itkwasm_dicom_emscripten/_version.py

@@ -1 +1 @@
-__version__ = "7.6.3"
+__version__ = "7.6.4"

packages/dicom/python/itkwasm-dicom-wasi/itkwasm_dicom_wasi/_version.py

@@ -1 +1 @@
-__version__ = "7.6.3"
+__version__ = "7.6.4"

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/_version.py

@@ -1 +1 @@
-__version__ = "7.6.3"
+__version__ = "7.6.4"

packages/dicom/typescript/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@itk-wasm/dicom",
-  "version": "7.6.3",
+  "version": "7.6.4",
   "description": "Read files and images related to DICOM file format.",
   "type": "module",
   "module": "./dist/index.js",

packages/dicom/typescript/src/read-dicom-tags-node.ts

@@ -3,14 +3,14 @@ import {
   InterfaceTypes,
   PipelineOutput,
   PipelineInput,
-  runPipelineNode
-} from 'itk-wasm'
+  runPipelineNode,
+} from "itk-wasm";
 
-import ReadDicomTagsOptions from './read-dicom-tags-options.js'
-import ReadDicomTagsNodeResult from './read-dicom-tags-node-result.js'
+import ReadDicomTagsOptions from "./read-dicom-tags-options.js";
+import ReadDicomTagsNodeResult from "./read-dicom-tags-node-result.js";
 
-
-import path from 'path'
+import path from "path";
+import { fileURLToPath } from "url";
 
 /**
  * Read the tags from a DICOM file
@@ -23,51 +23,58 @@ import path from 'path'
 async function readDicomTagsNode(
   dicomFile: string,
   options: ReadDicomTagsOptions = {}
-) : Promise<ReadDicomTagsNodeResult> {
-
-  const mountDirs: Set<string> = new Set()
+): Promise<ReadDicomTagsNodeResult> {
+  const mountDirs: Set<string> = new Set();
 
   const desiredOutputs: Array<PipelineOutput> = [
     { type: InterfaceTypes.JsonCompatible },
-  ]
+  ];
 
-  mountDirs.add(path.dirname(dicomFile as string))
-  const inputs: Array<PipelineInput> = [
-  ]
+  mountDirs.add(path.dirname(dicomFile as string));
+  const inputs: Array<PipelineInput> = [];
 
-  const args = []
+  const args = [];
   // Inputs
-  const dicomFileName = dicomFile
-  args.push(dicomFileName as string)
+  const dicomFileName = dicomFile;
+  args.push(dicomFileName as string);
 
   // Outputs
-  const tagsName = '0'
-  args.push(tagsName)
+  const tagsName = "0";
+  args.push(tagsName);
 
   // Options
-  args.push('--memory-io')
+  args.push("--memory-io");
   if (typeof options.tagsToRead !== "undefined") {
-    const inputCountString = inputs.length.toString()
-    inputs.push({ type: InterfaceTypes.JsonCompatible, data: options.tagsToRead as JsonCompatible })
-    args.push('--tags-to-read', inputCountString)
-
+    const inputCountString = inputs.length.toString();
+    inputs.push({
+      type: InterfaceTypes.JsonCompatible,
+      data: options.tagsToRead as JsonCompatible,
+    });
+    args.push("--tags-to-read", inputCountString);
   }
 
-  const pipelinePath = path.join(path.dirname(import.meta.url.substring(7)), 'pipelines', 'read-dicom-tags')
+  const pipelinePath = path.join(
+    fileURLToPath(import.meta.url),
+    "..",
+    "pipelines",
+    "read-dicom-tags"
+  );
 
-  const {
-    returnValue,
-    stderr,
-    outputs
-  } = await runPipelineNode(pipelinePath, args, desiredOutputs, inputs, mountDirs)
+  const { returnValue, stderr, outputs } = await runPipelineNode(
+    pipelinePath,
+    args,
+    desiredOutputs,
+    inputs,
+    mountDirs
+  );
   if (returnValue !== 0) {
-    throw new Error(stderr)
+    throw new Error(stderr);
   }
 
   const result = {
     tags: outputs[0].data as [string, string][],
-  }
-  return result
+  };
+  return result;
 }
 
-export default readDicomTagsNode
+export default readDicomTagsNode;

packages/downsample/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@itk-wasm/downsample-build",
-  "version": "1.8.0",
+  "version": "1.8.1",
   "private": true,
   "description": "Pipelines for downsampling images.",
   "type": "module",

packages/downsample/python/itkwasm-downsample-emscripten/itkwasm_downsample_emscripten/_version.py

@@ -1 +1 @@
-__version__ = "1.8.0"
+__version__ = "1.8.1"

packages/downsample/python/itkwasm-downsample-wasi/itkwasm_downsample_wasi/_version.py

@@ -1 +1 @@
-__version__ = "1.8.0"
+__version__ = "1.8.1"

packages/downsample/python/itkwasm-downsample/itkwasm_downsample/_version.py

@@ -1 +1 @@
-__version__ = "1.8.0"
+__version__ = "1.8.1"

packages/downsample/typescript/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@itk-wasm/downsample",
-  "version": "1.8.0",
+  "version": "1.8.1",
   "description": "Pipelines for downsampling images.",
   "type": "module",
   "module": "./dist/index.js",