First release

.coveragerc

@@ -2,5 +2,5 @@
 
 [run]
 branch = True
-source = IsoML
-include = */IsoML/*
+source = pyikt
+include = */pyikt/*

.gitattributes

@@ -0,0 +1,4 @@
+# GitHub syntax highlighting
+pixi.lock linguist-language=YAML linguist-generated=true
+# SCM syntax highlighting
+pixi.lock linguist-language=YAML linguist-generated=true

.github/workflows/deploy-gh-pages.yml

@@ -30,5 +30,5 @@ jobs:
       uses: peaceiris/[email protected]
       with:
         github_token: ${{ secrets.GITHUB_TOKEN }}
-        publish_dir: ./doc/_build/html
+        publish_dir: ./site
         commit_message: "[ci skip] ${{ github.event.head_commit.message }}"

.github/workflows/pypi.yml

@@ -0,0 +1,157 @@
+name: pypi
+
+on:
+  workflow_dispatch:
+  push:
+    tags:
+      - "*"
+
+jobs:
+  build_linux_wheels:
+    name: Build ${{ matrix.linux_tag }} wheels with cp${{ matrix.python-version }}
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        linux_tag: ["manylinux", "musllinux"]
+        python-version: ["310", "311", "312", "313"]
+    steps:
+      - uses: actions/checkout@v4
+      - name: Set up QEMU
+        uses: docker/setup-qemu-action@v3
+        with:
+          platforms: all
+      - name: Build wheels
+        uses: pypa/[email protected]
+        timeout-minutes: 720
+        env:
+          CIBW_BUILD: "cp${{ matrix.python-version }}-${{ matrix.linux_tag }}_*"
+          CIBW_ARCHS_LINUX: "x86_64 i686 aarch64"
+          CIBW_SKIP: "*-musllinux_i686"
+          CIBW_MANYLINUX_X86_64_IMAGE: "manylinux2014"
+          CIBW_MANYLINUX_I686_IMAGE: "manylinux2014"
+          CIBW_MANYLINUX_AARCH64_IMAGE: "manylinux2014"
+          CIBW_MUSLLINUX_X86_64_IMAGE: "musllinux_1_1"
+          CIBW_MUSLLINUX_I686_IMAGE: "musllinux_1_1"
+          CIBW_MUSLLINUX_AARCH64_IMAGE: "musllinux_1_1"
+          CIBW_ENVIRONMENT: 'PATH="$HOME/.cargo/bin:$PATH"'
+          CIBW_ENVIRONMENT_LINUX: 'PATH="$HOME/.cargo/bin:$PATH" CARGO_NET_GIT_FETCH_WITH_CLI="true"'
+          CIBW_BEFORE_BUILD: >
+            rustup default nightly &&
+            rustup show
+          CIBW_BEFORE_BUILD_LINUX: >
+            curl https://sh.rustup.rs -sSf | sh -s -- --default-toolchain=nightly --profile=minimal -y &&
+            rustup show
+      - uses: actions/upload-artifact@v4
+        with:
+          name: artifact-${{ matrix.linux_tag }}-cp${{ matrix.python-version }}
+          path: ./wheelhouse/*.whl
+
+  build_macos_wheels:
+    name: Build wheels on ${{ matrix.os }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [macos-13, macos-14]
+    steps:
+      - uses: actions/checkout@v4
+      - name: Set up rust
+        uses: dtolnay/rust-toolchain@stable
+        with:
+          toolchain: nightly
+      - run: rustup target add aarch64-apple-darwin && rustup target add x86_64-apple-darwin
+      - name: Build wheels
+        uses: pypa/[email protected]
+        timeout-minutes: 720
+        env:
+          CIBW_BUILD: "cp310-* cp311-* cp312-* cp313-*"
+          CIBW_ARCHS_MACOS: "universal2"
+          # arm64 and universal2 wheels are tagged with x86_64 because there's an issue with Poetry
+          # More information here: https://cibuildwheel.readthedocs.io/en/stable/faq/#how-to-cross-compile (CTRL + F "poetry")
+          # https://github.com/pypa/cibuildwheel/issues/1415
+          CIBW_REPAIR_WHEEL_COMMAND_MACOS: >
+            ls {dest_dir} &&
+            delocate-wheel --require-archs {delocate_archs} -w {dest_dir} -v {wheel} &&
+            for file in {dest_dir}/*.whl ; do mv $file ${file//x86_64/universal2} ; done
+          CIBW_ENVIRONMENT: 'PATH="$HOME/.cargo/bin:$PATH"'
+          CIBW_BEFORE_BUILD: >
+            rustup default nightly &&
+            rustup show
+      - uses: actions/upload-artifact@v4
+        with:
+          name: artifact-${{ matrix.os }}
+          path: ./wheelhouse/*.whl
+
+  build_windows_wheels:
+    name: Build wheels on ${{ matrix.os }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [windows-2019, windows-2022]
+    steps:
+      - uses: actions/checkout@v4
+      - name: Set up rust
+        uses: dtolnay/rust-toolchain@stable
+        with:
+          toolchain: nightly
+      - run: rustup toolchain install stable-i686-pc-windows-msvc
+      - run: rustup target add i686-pc-windows-msvc
+      - name: Build wheels
+        uses: pypa/[email protected]
+        timeout-minutes: 720
+        env:
+          CIBW_BUILD: "cp310-* cp311-* cp312-* cp313-*"
+          CIBW_ARCHS_WINDOWS: "AMD64 x86"
+          CIBW_ENVIRONMENT: 'PATH="$HOME/.cargo/bin:$PATH"'
+          CIBW_ENVIRONMENT_WINDOWS: 'PATH="$UserProfile\.cargo\bin;$PATH"'
+          CIBW_BEFORE_BUILD: >
+            rustup default nightly &&
+            rustup show
+      - uses: actions/upload-artifact@v4
+        with:
+          name: artifact-${{ matrix.os }}
+          path: ./wheelhouse/*.whl
+
+  build_sdist:
+    name: Build source distribution
+    # Can't use more than 12 jobs in parallel
+    needs: [build_macos_wheels]
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Build River
+        uses: ./.github/actions/install-env
+        with:
+          python-version: "3.13"
+
+      - name: Build dist
+        run: poetry build
+
+      - uses: actions/upload-artifact@v4
+        with:
+          name: artifact-sdist
+          path: dist/*.tar.gz
+
+  merge_artifacts:
+    runs-on: ubuntu-latest
+    needs: [build_linux_wheels, build_macos_wheels, build_windows_wheels, build_sdist]
+    steps:
+      - name: Merge Artifacts
+        uses: actions/upload-artifact/merge@v4
+        with:
+          name: artifact
+          pattern: artifact-*
+
+  upload_pypi:
+    needs: merge_artifacts
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/[email protected]
+        with:
+          name: artifact
+          path: dist
+
+      - uses: pypa/[email protected]
+        with:
+          user: __token__
+          password: ${{ secrets.PYPI_API_TOKEN }}

.github/workflows/python-app.yml

@@ -30,4 +30,4 @@ jobs:
         uses: codecov/[email protected]
         with:
           token: ${{ secrets.CODECOV_TOKEN }}
-          slug: IsolationKernel/IsoML
+          slug: IsolationKernel/pyikt

.gitignore

@@ -181,3 +181,12 @@ cython_debug/
 
 # VsCode
 .vscode/
+
+# test
+env.ps1
+env.sh
+origin_data/
+myx_test/
+# pixi environments
+.pixi
+*.egg-info