v0.5.3

What's Changed

• Fix lmfit optimization function by @JR-1991 in #28
• Update pyenzyme and lmfit dependencies by @JR-1991 in #29

Full Changelog: v0.5.2...v0.5.3

v0.5.2

• Add EnzymeML export for Dataset
• Fix mcmc using deprecated unstable get_observable_states for get_state_order(as_indices=True, modeled=True)

Full Changelog: v0.5.0...v0.5.2

v0.5.0

What's Changed

• Improve import of data from EnzymeML Documents + handling of nan data by @haeussma in #21
• Solver and penalties update by @JR-1991 in #22
• Docs by @JR-1991 in #23
• Validation dataset by @JR-1991 in #24
• Add dynamic solver usage and arviz import by @JR-1991 in #25
• Migrate to uv dependency management by @JR-1991 in #26
• Add reaction network modelling and optimize library by @JR-1991 in #27

Full Changelog: v0.4.0...v0.5.0

v0.4.0

What's Changed

• Update arviz version to 0.18.0 by @haeussma in #17
• Inclusive species support by @haeussma in #19

New Contributors

• @haeussma made their first contribution in #17

Full Changelog: v0.3.2...v0.4.0

v0.3.2

What's Changed

• Sensitivity matrix analysis by @JR-1991 in #12
• Migration to pyDantic V2

Full Changelog: v0.3.1...v0.3.2

Catalax v0.3.1 Fix

• Changed numpyro method to set_host_device_count due to rename

Full Changelog: v0.3.0...v0.3.1

Catalax v0.3.0

What's Changed

• Updated MCMC method by @JR-1991 in #5
• Added universal ODEs and Strategies by @JR-1991 in #9
• Added surrogate HMC by @JR-1991 in #10
• Sensitivity matrix by @JR-1991 in #11

Full Changelog: https://github.com/JR-1991/Catalax/commits/v0.3.0