A collection of tips, tricks, and setup guides for running Claude Code at Janelia Research Campus.
New to Claude Code? Start with the hands-on walkthrough that covers installation, permissions, planning mode, and practical exercises:
- Getting Started Guide - Janelia Claude-a-thon walkthrough with bug fixing, code analysis, and rapid prototyping exercises
Learn about the different sandboxing approaches and how to configure them:
- Sandboxing Overview - Comparison of native, container, and local user sandboxing methods
- Native Sandbox - Using Claude Code's built-in sandbox
- Dev Container Setup - Docker-based development environment
See example-settings.json for an example Claude Code settings file that includes:
- Sandbox path permissions for Pixi
- Default permission mode configuration
- Allowed and denied operations