OME-ZARR support for BigStitcher fusion#63
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StephanPreibisch merged 32 commits intomasterfrom Jan 20, 2025
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…ngle 5D container) downsampling in 5D still missing
missing: writing the actual OME-ZARR metdadata
…no multi-res) was successful
added comments and TODO
add debug output
…ft, can be addressed in BigStitcher-Spark if necessary)
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The latest version of "OME-Zarr" aka "OME-NGFF" is version 0.5. OME-Zarr version 0.4 references version 2 of the Zarr specification. I think you mean to say that BitStitcher has implemented support for OME-Zarr version 0.4. |
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Added support for OME-ZARR v2 export to BigStitcher. Tested it locally with Fiji, and in the cloud with Neuroglancer, OME-NGFF-Validator, and Allen Volume Viewer.
@krokicki @mkitti @tpietzsch @bogovicj @yuriyzubov