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Protein Viewer and Themes

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@Jhsmit Jhsmit released this 24 Sep 14:19
· 1750 commits to master since this release

This release features an embedded Protein Viewer and implementation of Panel Themes / Templates.

Main features:

  • NGL Protein viewer
  • Streamlined layouts with Elvis (https://github.com/LeonvanKouwen/elvis) with Panel Templates (panel >0.10.0)
  • Color protein by custom continuous color map (36e7070)
  • Added Dark/Light themes
  • Separate app for loading single state fitting results and applying classification (coloring)
  • Separate app for comparing two protein states

Other changes:

  • Added DataSource object which is now used for 'publishing' data
  • Control and Figure panels are now supplied to controller as their `class`` rather than a string
  • Added setup_hooks() method to couple Figures to Controllers
  • Added a Logging panel
  • Fixed ignoring prolines to always be True

Fixes:

  • read_to_np can read files with two comment lines and with hex color codes (#000000)
  • Fixed datapoints without coverage showing up (#89)
  • Fixed coverage intervals (#91)
  • Various bugfixes
  • Improved documentation