Skip to content

Use multithread parameter for samtools depth#33

Open
SAMtoBAM wants to merge 2 commits intoJiaoLaboratory:mainfrom
SAMtoBAM:main
Open

Use multithread parameter for samtools depth#33
SAMtoBAM wants to merge 2 commits intoJiaoLaboratory:mainfrom
SAMtoBAM:main

Conversation

@SAMtoBAM
Copy link

@SAMtoBAM SAMtoBAM commented Jan 7, 2026

Just looking for minimal ways to try improve speed and saw that samtools depth doesn't use the multithreading option; unlike all the rest of the samtools functions

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant