Add @main entry point and AppBundler support for standalone distributions

.github/workflows/Release.yml

@@ -0,0 +1,105 @@
+name: Build Release Assets
+
+on:
+  workflow_dispatch:
+    inputs:
+      upload_tag:
+        description: 'Optional: Release tag to upload to'
+        required: false
+        default: ''
+        type: string
+  release:
+    types: [created]
+
+jobs:
+  build:
+    name: Build ${{ matrix.os }}-${{ matrix.arch }}
+    runs-on: ${{ matrix.runner }}
+    strategy:
+      matrix:
+        include:
+          - runner: macos-latest
+            os: macos
+            arch: x86_64
+          - runner: macos-latest
+            os: macos
+            arch: aarch64
+          - runner: ubuntu-latest
+            os: linux
+            arch: x86_64
+            xvfb: true
+          - runner: ubuntu-24.04-arm
+            os: linux
+            arch: aarch64
+            xvfb: true
+          - runner: windows-latest
+            os: windows
+            arch: x86_64
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Remove System32 OpenSSL DLLs (Windows)
+        if: runner.os == 'Windows'
+        run: |
+          $system32 = "C:\Windows\System32"
+
+          foreach ($dll in @("libcrypto-3-x64.dll", "libssl-3-x64.dll")) {
+            $path = Join-Path $system32 $dll
+            if (Test-Path $path) {
+              Remove-Item -Path $path -Force
+              Write-Host "Removed $dll from System32"
+            } else {
+              Write-Host "$dll not found in System32"
+            }
+          }
+        shell: pwsh
+
+      - uses: julia-actions/setup-julia@v2
+        with:
+          version: '1.11'
+
+      - uses: julia-actions/cache@v1
+
+      - name: Install dependencies
+        run: julia --project=meta -e 'using Pkg; Pkg.instantiate()'
+
+      - name: Build
+        env: 
+          MACOS_PFX_PASSWORD: ${{ secrets.MACOS_PFX_PASSWORD }}
+          WINDOWS_PFX_PASSWORD: ${{ secrets.WINDOWS_PFX_PASSWORD }}
+        run: |
+          ${{ matrix.xvfb && 'xvfb-run -s ''-screen 0 1024x768x24''' || '' }} julia --project=meta meta/build.jl --target-platform=${{ matrix.os }} --target-arch=${{ matrix.arch }} --build-dir=build
+
+      - uses: actions/upload-artifact@v4
+        with:
+          name: ${{ matrix.os }}-${{ matrix.arch }}
+          path: build/*
+          retention-days: 1
+
+  upload:
+    name: Upload to release
+    runs-on: ubuntu-latest
+    needs: build
+    if: github.event_name == 'release' || github.event.inputs.upload_tag != ''
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: actions/download-artifact@v4
+        with:
+          path: ./artifacts
+
+      - name: Upload to release
+        env:
+          GH_TOKEN: ${{ github.token }}
+        run: |
+          TAG_NAME="${{ github.event.inputs.upload_tag || github.event.release.tag_name }}"
+          echo "Uploading to release: $TAG_NAME"
+
+          find artifacts/ -type f | while read -r file; do
+            echo "Uploading: $file"
+            gh release upload "$TAG_NAME" "$file"
+          done
+
+          echo "All artifacts uploaded successfully!"

.gitignore

@@ -35,4 +35,8 @@ examples/5.koma_paper/mrf/**/*.mrd
 examples/5.koma_paper/comparison_accuracy/**/*.mat
 examples/5.koma_paper/comparison_accuracy/**/*.h5
 !examples/5.koma_paper/Manifest.toml
-*_w.phantom
+*_w.phantom
+!/meta/**/deps/
+!/meta/patches/WebIO/deps/bundlepaths.jl 
+!meta/Manifest.toml
+!Manifest.toml

KomaMRIBase/src/datatypes/Phantom.jl

@@ -247,7 +247,7 @@ function brain_phantom2D(; axis="axial", ss=4, us=1, tissue_properties = Dict())
     ssx, ssy, ssz, usx, usy, usz = check_phantom_arguments(2, ss, us)
 
     # Get data from .mat file
-    path = @__DIR__
+    path = joinpath(Base.pkgdir(@__MODULE__), "src/datatypes")
     data = MAT.matread(path * "/phantom/brain2D.mat")
 
     # subsample or upsample the phantom data
@@ -336,7 +336,7 @@ function brain_phantom3D(; ss=4, us=1, start_end=[160, 200], tissue_properties=D
     # check and filter input    
     ssx, ssy, ssz, usx, usy, usz = check_phantom_arguments(3, ss, us)
     # Get data from .mat file
-    path = @__DIR__
+    path = joinpath(Base.pkgdir(@__MODULE__), "src/datatypes")
     data = MAT.matread(path * "/phantom/brain3D.mat")
 
     # subsample or upsample the phantom data
@@ -405,7 +405,7 @@ function pelvis_phantom2D(; ss=4, us=1)
     ssx, ssy, ssz, usx, usy, usz = check_phantom_arguments(2, ss, us)
 
     # Get data from .mat file
-    path = @__DIR__
+    path = joinpath(Base.pkgdir(@__MODULE__), "src/datatypes")
     data = MAT.matread(path * "/phantom/pelvis2D.mat")
 
     # subsample or upsample the phantom data

KomaMRIPlots/src/ui/DisplayFunctions.jl

@@ -1167,7 +1167,8 @@ function plot_phantom_map(
         @warn "For performance reasons, the number of displayed spins was capped to `max_spins`=$(max_spins)."
     end
 
-    path = @__DIR__
+    #path = @__DIR__
+    path = joinpath(Base.pkgdir(@__MODULE__), "src/ui")
     cmin_key = minimum(getproperty(obj, key))
     cmax_key = maximum(getproperty(obj, key))
     if key == :T1 || key == :T2 || key == :T2s