Klaus 65 extend summaries table patch

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "jabs-postprocess"
-version = "0.5.0"
+version = "0.5.1"
 description = "A python library for JABS postprocessing utilities."
 readme = "README.md"
 license = "LicenseRef-PLATFORM-LICENSE-AGREEMENT-FOR-NON-COMMERCIAL-USE"

src/jabs_postprocess/utils/project_utils.py

@@ -1024,12 +1024,10 @@ def bouts_to_bins(
             # We use a weighted statistic definitions here
             # Weights are the proportion of bout contained in the bin (percent_bout)
             if results["bout_behavior"] > 0:
-                results["avg_bout_duration"] = (
-                    np.sum(
-                        behavior_bins["duration"].values
-                        * behavior_bins["percent_bout"].values
-                    )
-                    / results["bout_behavior"]
+                results["avg_bout_duration"] = np.average(
+                    behavior_bins["duration"].values
+                    / behavior_bins["percent_bout"].values,
+                    weights=behavior_bins["percent_bout"].values,
                 )
                 results["latency_to_first_prediction"] = behavior_bins["start"].min()
                 results["latency_to_last_prediction"] = (

tests/utils/test_project_utils.py

@@ -759,15 +759,15 @@ def test_bouts_to_bins_split_bout_weighted_statistics(self):
         # Both bins should have:
         # - bout_behavior = 0.5 (half the bout counted)
         # - time_behavior = 300 (half the frames)
-        # - avg_bout_duration = 300 (the actual duration in each bin)
+        # - avg_bout_duration = 600 (duration remains same, average of 1 sample)
         # - variance = NaN (only one bout, even if split)
         assert len(result) == 2
 
         for i in range(2):
             assert abs(result.iloc[i]["bout_behavior"] - 0.5) < 0.01
             assert result.iloc[i]["time_behavior"] == 300
-            # When a bout is split, the avg_bout_duration is the fractional duration
-            assert abs(result.iloc[i]["avg_bout_duration"] - 300) < 0.1
+            # When a bout is split, the avg_bout_duration is still the total duration
+            assert abs(result.iloc[i]["avg_bout_duration"] - 600) < 0.1
             assert pd.isna(result.iloc[i]["bout_duration_var"])
 
     def test_bouts_to_bins_multiple_split_bouts_variance(self):

vm/jabs-postprocess.def

@@ -62,5 +62,5 @@ From: ghcr.io/astral-sh/uv:python3.10-bookworm-slim
 
 %labels
 	Author "The Kumar Lab"
-	Version "0.1.0"
+	Version "0.5.1"
 	Description "JABS post-processing container with Python 3.10"