PhenoLIP Project Page

Project webpage for the CVPR 2026 paper:

PhenoLIP: Integrating Phenotype Ontology Knowledge into Medical Vision–Language Pretraining

Ziqing Fan, Cheng Liang, Chaoyi Wu, Ya Zhang, Yanfeng Wang, Weidi Xie

Quick Start

View Locally

Simply open index.html in your web browser:

open index.html  # macOS
xdg-open index.html  # Linux
start index.html  # Windows

Or use a local web server:

python -m http.server 8000
# Then visit http://localhost:8000

Deploy to GitHub Pages

1. Create a new GitHub repository (e.g., phenolip-webpage)

2. Push this directory to GitHub:

git init
git add .
git commit -m "Initial commit: PhenoLIP project webpage

Co-Authored-By: Warp <agent@warp.dev>"
git remote add origin https://github.com/YOUR_USERNAME/phenolip-webpage.git
git branch -M main
git push -u origin main

3. Enable GitHub Pages:

   • Go to repository Settings → Pages
   • Source: Deploy from a branch
   • Branch: main → /(root)
   • Click Save

4. Your website will be available at:

   https://YOUR_USERNAME.github.io/phenolip-webpage/
   

Structure

phenolip-webpage/
├── index.html          # Main webpage
├── resources/          # Images and assets
│   ├── overview.png    # Main overview figure
│   ├── pipeline.png    # Method pipeline diagram
│   ├── bibtex.txt      # BibTeX citation
│   └── *.png           # Additional figures
└── README.md           # This file

Updating Content

Update Links

When your paper/dataset/demo links are available, update the following sections in index.html:

• Line 222: <a href='#'>[Paper]</a> → Replace # with paper URL
• Line 232: <a href='#'>[Dataset]</a> → Replace # with dataset URL
• Line 237: <a href='#'>[Demo]</a> → Replace # with demo URL
• Line 545: <a href="#">[Paper]</a> → Replace # with paper URL

Update Images

Place new images in the resources/ directory and reference them in index.html:

<img src="./resources/your-image.png"/>

Key Metrics Displayed

• 524K+ image-text pairs
• 3,000+ phenotypes
• 7,800+ benchmark pairs
• 36.56% zero-shot accuracy
• +8.85% improvement over BiomedCLIP
• +15.03% improvement over BIOMEDICA

Citation

If you use this webpage template or find PhenoLIP useful, please cite:

@inproceedings{fan2026phenolip,
  title={PhenoLIP: Integrating Phenotype Ontology Knowledge into Medical Vision--Language Pretraining},
  author={Fan, Ziqing and Liang, Cheng and Wu, Chaoyi and Zhang, Ya and Wang, Yanfeng and Xie, Weidi},
  booktitle={Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)},
  year={2026}
}

License

The webpage template is based on the webpage-template by Phillip Isola and Richard Zhang.