Optimized#5

Merged

murrellb merged 9 commits intomainfrom

Feb 12, 2026

Commits on Feb 6, 2026

Add GPU support via device-agnostic inference path
murrellb
committed

Commits on Feb 7, 2026

Add cuTile GPU kernels for 1.45x speedup over Python ESMFold

claudey
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claude
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Refactor: import protein layers from Onion, GPU kernels from OnionTile

claudey
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claude
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Import set_chunk_size! from Onion for ESMFoldModel extension

claudey
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claude
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Make OnionTile optional: remove hard dependency

claudey
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claude
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Commits on Feb 11, 2026

Add OnionTile direct dependency (to be reverted in cleanup)

claudey
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claude
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Revert OnionTile direct dependency — use GPU_test project instead

claudey
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claude
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Add modular pipeline API: composable inference stages for research use

claudey
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claude
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Commits on Feb 12, 2026

Update docs with pipeline API, AD-compatible ESM2, and constants

claudey
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claude
committed